Gene TDE0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0364 
Symbol 
ID2741084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp410139 
End bp411695 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content29% 
IMG OID637159236 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_970978 
Protein GI42525880 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG CTTATAAGCA TTTTTTTATG GCTATGGCAG TTCTTGCCTT TGTGTCGGCT 
ATGACATCAT TGGTTGTACC TTTTCTGTTA AGTTTTTGGG CAAAAACCGA TGCTGAGATG
AATTTAAAAA GATTTTTTAT TGTTATATCG GTGCTTGTAC TGATGTTCTT ACTTAAAACC
GCTATAATTT TTTTGCGTGA GAATTTTGCA AAACATTTTA ATATAAAAAA TGCCAAAAAC
ATTATTGAAA AAATTTTAAG GTTAAAATAC GATGCGATTA TTTCTCAAGG GAATATGAAT
TTAGTTGAGA GGATGGCACA GGCTGTAAAC AATATGTACA TATATATGAC GGGAGATGCC
GTTCTGATAT GGTCAAGCAT AATTTCAACA ATAATTATTT TAATCGCAAT ATTTTTTGAT
AATTTCATTA TAGGTTTAAT ACTGCTTGTT TTAATTCCAA TAAATTATTT AGGTTATAAA
TCTTTGAATT CAGAATTAAA AAAACGCTCT CAAGTTATGC AAACAAGTAC TGCAACGGGA
TTCCAAGAAA TACTTTCAGT TGTAAACCAA ACAGATTATT TAAAACAATG CACCGATTAT
GATATTGTAC TAAACCAATT AAAACCTGCA TTGGATAAAA TTTACGGAAG CATGGCCCAA
GTAAACAAAT ATGCTCAAAC TTCTTCATCG TTTATATCAT CGCTTAATTC AATGCTGCAG
ACGGTTTGTA TTTTACTTGT TATGTACAAT TATCTAAGCG GAGAAAATCA AGTTTTACCG
GTTGTAATTT ATACAATTGT ACTTCCTTTA TTTTTTTCCA ATATCAGTAT AATTACAAAT
ATTAATTTAA CCAAAAATAA TCTAAAAGTC TCACAAGAAT TTATTGCATT TTTAGATTCG
GAACAAGAAA AAGATTCAAA TGAGACAATC AGATCGATTG AAAAAATAGA ATTTGATATC
GGTGCAATAC AAATAGGAGA AGAAATATTT AAGGCCAATA TAAAAGATAA GTTTATAAAA
GGCGACATTG TTTGGGTACA GGGAAAAAGC GGCTCGGGAA AGTCAAGTTT AATGAAACAA
CTTGTAAAAT TTAGGAAAAC ATCAGAAATC TTAATAAACG AAAAACCGAT TTCTTCTATT
AATAATACTT GTATCAGGTC TCTTATTGAT TATATCCCGC AAAATAATTC AATTATCAAT
GGAACAATCC GTGATAATTT ATTTTTAAAC AAAAGTCATT CAATTGAAAC TGAAGAAAAA
TTAAAAAAAA GCGAGCTCCT TTCTACAATT TTGCAAAACA AAAACTTTGA TACAATAATA
ATGGATATGG GGGCTAATCT TTCAGGAGGA GAAAAACAAA AACTTGCCAT AGCCCGAAGC
TTATATTCAG ATGCAGAAGT TTTAATCTTT GATGAGGTTA CAGCCAATAT TGATGCTGAA
AGCACGATCC TAATTTTAAA TGCAATAAAA AATATTTGTA AGAATAAAAT AGTCTTTATA
ATTTCACATG ACACATTGCC TGAAAATTTC GCCAATAAAG TTATACGGAT GGAATAA
 
Protein sequence
MNKAYKHFFM AMAVLAFVSA MTSLVVPFLL SFWAKTDAEM NLKRFFIVIS VLVLMFLLKT 
AIIFLRENFA KHFNIKNAKN IIEKILRLKY DAIISQGNMN LVERMAQAVN NMYIYMTGDA
VLIWSSIIST IIILIAIFFD NFIIGLILLV LIPINYLGYK SLNSELKKRS QVMQTSTATG
FQEILSVVNQ TDYLKQCTDY DIVLNQLKPA LDKIYGSMAQ VNKYAQTSSS FISSLNSMLQ
TVCILLVMYN YLSGENQVLP VVIYTIVLPL FFSNISIITN INLTKNNLKV SQEFIAFLDS
EQEKDSNETI RSIEKIEFDI GAIQIGEEIF KANIKDKFIK GDIVWVQGKS GSGKSSLMKQ
LVKFRKTSEI LINEKPISSI NNTCIRSLID YIPQNNSIIN GTIRDNLFLN KSHSIETEEK
LKKSELLSTI LQNKNFDTII MDMGANLSGG EKQKLAIARS LYSDAEVLIF DEVTANIDAE
STILILNAIK NICKNKIVFI ISHDTLPENF ANKVIRME