Gene TDE0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0230 
SymbolrecF 
ID2739082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp262889 
End bp263971 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content35% 
IMG OID637159104 
ProductDNA replication and repair protein RecF 
Protein accessionNP_970846 
Protein GI42525748 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000612971 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCTTTC TTTCCGCCTC TTTCTATAAT TTTAGAAATC TGGAAAATGC TACAGTAGAT 
ATTTCTTCCC CTGAAGTTTT TTTAGTAGGA AAAAACGGAC AGGGGAAGAC TAATTTTTTA 
GAAGCTCTCT ATGTTTCTTC TTATGGAACT TCATTTAGAA CTCGCTCTTT AGCTCAGATA 
TGTACAAAAG ATGAAAAAGA ATTTAGTATA AGGGCTCTTT ATAAAGAAAG CGATAATATA 
AGTCATACTA TTTCGATAAT AATTCAAGAT AAAAAAAAAG ATATTCAAAA GAATTTTAAA 
AAAATTAAAA ATTCTAAGGA ATTGATAAGC ACTATTCCAT GTATTTTGTT TCATGGGGAC 
GATATAGAAT TTGCCGTTGG AACTCCTTCA AGGAAGAGGT TTTTTATAGA TCAATCGGTT 
TCGCTGTGTA ATTCCGACTT TATAGAAGTT TTAGTAAAAT ATTCAAAGGC CTTAAAATCA 
AGAAATGTAA TTTTGGAACA AAAAAAAGCT TCTCTTTTAG ATTCTATAGA TGAAATTTTT 
GCTTCCCTTG CTCTTTTAAT CACAAATGAA AGAAAAAATA TTGTAGAGGA GTATGCAAAG 
CATTTTTCTT TAATCTATGA GGAAATAAGC GGTGTTTCCG GTGTAGAAAT GGTTTATCGC 
CCTTCGGTTA AGGTAGAAAG TGAAGAAGAT TTGCTTATCT TGCTTGCAGA AAAACGCCAA 
AACGATTTGA TTGATAGGAC GAGCTCTACA GGTCCGCACC GCGACCGCAT TCATTTTATA 
AAGGATAAAA AACCCTTTAC CGAAAGAGCC TCAAACGGCC AAAGGCGGCT TATCTCCCTT 
GTTTTAAGAA TGATTCAAGC CAAAATCTAT TCCGAAAAAA CCGGCCGAAA ACCTATTTTT 
CTGATGGACG ATATTCTTTT AGAACTCGAC CCCGAAAAAC GCCAAAAGTT CATGGAGCTC 
CTGCCCCCCT ACGAACAACT CTTTTGCACC TTCCTCCCCG GCGAACCCTA CAAAAACTAC 
CAAAAAGAAA ACACCAAAAT ATTTTTCGTT GAAGATGGAA AGTTTAGTGT GGAGAGGGGG 
TAG
 
Protein sequence
MPFLSASFYN FRNLENATVD ISSPEVFLVG KNGQGKTNFL EALYVSSYGT SFRTRSLAQI 
CTKDEKEFSI RALYKESDNI SHTISIIIQD KKKDIQKNFK KIKNSKELIS TIPCILFHGD 
DIEFAVGTPS RKRFFIDQSV SLCNSDFIEV LVKYSKALKS RNVILEQKKA SLLDSIDEIF 
ASLALLITNE RKNIVEEYAK HFSLIYEEIS GVSGVEMVYR PSVKVESEED LLILLAEKRQ 
NDLIDRTSST GPHRDRIHFI KDKKPFTERA SNGQRRLISL VLRMIQAKIY SEKTGRKPIF 
LMDDILLELD PEKRQKFMEL LPPYEQLFCT FLPGEPYKNY QKENTKIFFV EDGKFSVERG