Gene TDE0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0229 
Symbol 
ID2739081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp260956 
End bp262836 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content25% 
IMG OID637159103 
ProductATPase family protein 
Protein accessionNP_970845 
Protein GI42525747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00298001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATTA AAGTACAGAA AGCAGCATCT CTATTTTTCC CAAATACATC ATTAGAATTT 
GTATATTTTG AGGCTATAGC TAATTCTATA GATGCAAATG CAAGTAGAGT TATAATTAAT
ATAGAACTTG AAAAATTTTC AGAAGAAAAA AACTTATTAA TTTCAATAGA GGATAACGGT
GAAGGTTTTA TTGATAGAAA TTTTGAGAAA TTTTGTAGCA TATTAGATAC AGAAGATAAA
CAACACAAAG GTATTGGAAG GTTAGTTTAT TTAAACTATT TTTCTAATAT AAAAATAGAG
AGTATATTTT CTAATAAGAA ACGTGTTTTT ATTTTTAATG ATTTTTTTGA TGGAGCAAAT
GAATTATCTG ATACAATTCA AGAAAATAAA ACTATTCTGT CTTTTGAAGG ATATAAAAAA
GATAAGATTG GAAAATATGA TTATATAATC CCAGAATCTA TAAAAGAATC AATTATTTAT
CATTTTTTAC CAAAATTATA TTCGATGAAA ATAAAAAATA ACATTTTTCA TTTGTCAATC
AATCTTAAAA CACATGATGA TAATACTGAA AGAGGTTTTT ATACACATTC AGTAGAATTT
GATTTAAATG ATTTACCTGT TTTAAAGGAA AAAACTATTA ATGATAGTAC ATCATTATTT
AGCTATTTTA AATTGATGTA TTCAATTGAA CATGTTTATA CTGATCAATC TGTAATAAGT
GCTATTTGTG CCGATAATAG AACTATCCCA ATGGAATTAA TAACAAATAA AGATTTTCCT
TTTGGATATA AAATGGTTTT TATTCTTTAT TCTGATAATT TTGATGGTAA AACTGATAAT
GCAAGAGGTG CATTAGAACT TGATAATAAA ACGATTAATT ATGTAAGACA AGTGTTCTTA
AAGCTAGTTG CTGAGGTTAT TCAAGAAGAA ATACCAAGCA TAGTAAAACA AAATAAAGCT
GTTGAAATAA AATTGGAAAA TGATTATCCA CATCTTGATG GATATATTAA TACTGAAACA
ATTGGCCTTG TAGATAAAGA TAGTATAATT GAAGAAGCTC AAATGAAATT TTTTAATGAA
CAGAAAGAAT TACTTGAAGC TTCTGATTTA TCTGATGAGC AATACAAAAA ATCATTAGAA
TTTTCATCTA GAATTTTAAT GGAATATATT CTTTACAGAA CTAAAATAAT ATCAAAATTA
AAAAAAATAG ATAAAAATAA TAATGAGTCA GAAATACATG ATCTAATTGT TCCAAGAAAA
AAGGAATACA ATAAAGATAA TTTGATTGAA GATATTTATC AAAACAATGC TTGGGTATTA
GATGATAAAT ATATGACCTA TAGTAAAGTG TTAAGTGATA AAGAAATAGA AGATATTTAT
AATACATTAT CTATTAGTAG TACTCATGTT TATTCTCATA AAGATAATGG AAGACCAGAT
ATTACTATTA TTTTTTCAAA TGATCCTAAA AAATTTACTG CTGTTGATGT AGTAATTATT
GAATTTAAGA AATTAGGTTT AAAATTGGCT TATAAGGAAG AAATTATAAG TCAATTAAAA
CAAAGAGCTA GAAGGCTCTT AGAATTTTAT CCAAATAAAA TACAACGGAT TTGGTTTTAT
GGTATTATTG ATTTTGATAA GGAATTTAAG GCATCGCTAA TAGAAAGTGG ATTCACGAAG
TTGTTTTCAA ATGGAGAATT ATTTTATAAA AGTCAGGATA TAGTTATTAA TCCAGAAACA
GAACAAATTA AGATTGCAGA TATTTTTTTA CTTTCTTATG ATGCAATGCT TGATGATGCA
GAATCAAGGA ATGAGACATT TTTAAGAATA TTAAAACAAG GAATCAAACG ACCAGTATCA
GAAAGCCAAT CCACGCTTTA A
 
Protein sequence
MRIKVQKAAS LFFPNTSLEF VYFEAIANSI DANASRVIIN IELEKFSEEK NLLISIEDNG 
EGFIDRNFEK FCSILDTEDK QHKGIGRLVY LNYFSNIKIE SIFSNKKRVF IFNDFFDGAN
ELSDTIQENK TILSFEGYKK DKIGKYDYII PESIKESIIY HFLPKLYSMK IKNNIFHLSI
NLKTHDDNTE RGFYTHSVEF DLNDLPVLKE KTINDSTSLF SYFKLMYSIE HVYTDQSVIS
AICADNRTIP MELITNKDFP FGYKMVFILY SDNFDGKTDN ARGALELDNK TINYVRQVFL
KLVAEVIQEE IPSIVKQNKA VEIKLENDYP HLDGYINTET IGLVDKDSII EEAQMKFFNE
QKELLEASDL SDEQYKKSLE FSSRILMEYI LYRTKIISKL KKIDKNNNES EIHDLIVPRK
KEYNKDNLIE DIYQNNAWVL DDKYMTYSKV LSDKEIEDIY NTLSISSTHV YSHKDNGRPD
ITIIFSNDPK KFTAVDVVII EFKKLGLKLA YKEEIISQLK QRARRLLEFY PNKIQRIWFY
GIIDFDKEFK ASLIESGFTK LFSNGELFYK SQDIVINPET EQIKIADIFL LSYDAMLDDA
ESRNETFLRI LKQGIKRPVS ESQSTL