| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0116 |
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| Symbol | |
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| ID | 2741731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 134849 |
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| End bp | 135730 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637158986 |
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| Product | hypothetical protein |
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| Protein accession | NP_970733 |
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| Protein GI | 42525635 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.27353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA AAGGTATTTT TGTTATTCTT TTTATTCTTA ATCTCGCCTT GCTATCTGCA
AAGCTGTCTG CAAATCCCTT TACGGGGAAA AAAAATTCAC CTACACCCGT ATATCAGGGA
CAGCCTTCAG AAAATATTTT AAAGGGGCAG CGTATTTTAA ACCAAAAGCT GGGAGACTAT
ATAAACGCTT GGAAAGAAAA TAAAAATTTT GCTGTTTTAT TGTCCATTCT GGCCCTTTCA
TTTTTATACG GCTTGGTACA TGCGGCAGGT CCGGGACACC GTAAAACCAT TATCTTCTCT
TTTTACCTTA CAAAAGAATC AAAACGCTTA GAGCCTCTTT TTACAGGCCT TGCTTTGGCA
GGAATGCATG GAGGAGCAGC CATAGTCCTA ATGATGATTT TCAAGGGCCT TTCCGGAGCC
ATCCTCTCAC GCTCAAATGA TGCAATGATA TATATGGAGG GTGCTTCTTT TTTAATCTTA
ATAATTTTAT CCCTTTACGG AATAATCGAT GCGGTAAAGG ATATAAATAC AAAAAAGGAT
TCAAACCATA AAAAGCTTAA ACTTGGAGCA ATCTTATTAA GCGGTATTTA TCCCTGTCCG
GCGGCCATGC TTGTTTTGGT CTTAGCCGTA AGCCTAAATC TCTTAGCCTT AGGGATCTTT
GCAGTAATAG CTATGTCCGT AGGCATGAGT ATTCCGATAA TCGCTTCGGG ATATTTGGCA
TGGGCCGGAA GAACGAGTCT TTTTTACAAA TTAAAGGGAA AAGAAAGAAT TATAGCCCTG
ATAGGTTCTA TCCTTCAAAT CGGAGCTTAC GGCTTTTTAC TCTACATTTC GGTAAAAACG
GCCTTGCCTT TTATTCTAAG TTTGTTTAGA ATGCTAAAAT AG
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| Protein sequence | MKKKGIFVIL FILNLALLSA KLSANPFTGK KNSPTPVYQG QPSENILKGQ RILNQKLGDY
INAWKENKNF AVLLSILALS FLYGLVHAAG PGHRKTIIFS FYLTKESKRL EPLFTGLALA
GMHGGAAIVL MMIFKGLSGA ILSRSNDAMI YMEGASFLIL IILSLYGIID AVKDINTKKD
SNHKKLKLGA ILLSGIYPCP AAMLVLVLAV SLNLLALGIF AVIAMSVGMS IPIIASGYLA
WAGRTSLFYK LKGKERIIAL IGSILQIGAY GFLLYISVKT ALPFILSLFR MLK
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