Gene TDE0115 details

Gene Information

• Locus tag: TDE0115
• ID: 2741730
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 134194
• End bp: 134841
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637158985
• Product: hypothetical protein
• Protein accession: NP_970732
• Protein GI: 42525634
• COG category: [R] General function prediction only
• COG ID: [COG3683] ABC-type uncharacterized transport system, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0287107
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAGAT CAAAAAAAAA TATACTGTTA TTTACCTTTT TAGTTTTGAT AAATTTTCAA 
TCCTTTTCTC ACCCTCATAT GTGGTTTACC AGCTCTCTTG AAGTCATTTT TGCAGGAAAA 
ACCTTAAAAG GAGCCTATGT TACATGGACC TTTGATAGAT TTTTTAGTGC GGATATTATA 
AGCGGTTATG ACTTAAACGG AGATGGTGTA TTTAGTGCAG CGGAAACAGC TGATGTATAC 
GAAAATGCTT TTAGTTATAC TGAAAATTAT TACTATTTTA CATTTATCAG GCAGGGAGAA 
AAGCGTACAA GTCCCGAACA TATTGAAAAG GCTTCCTTTT CCGTTTGGCA AAATAAGGGG 
ATTGTAAGTT ACCGCTTTTT TATAGATTTA AGCGGGTTTA AGGGGCAGGA AATTTTTTTA 
GCCTGTTACG ATTATACTTT CTTTTGCGAT ATTACCTATC CTGAAAATAC GGCCGCAAAA 
TTCATATATG ACAAGAGTCT AATAAGCCCC TCATACTCCA TTATCGAAAA TAAAAACTAT 
CCCGTTTACT ATGACCCTCT GGGAGCGATG GATGATAATA GAATATATTA TAAGTGGGCT 
CCCGGCCTTA ATACCTATTA TCCAAAAGAG GTAAGAATCA GGTTTTAA 

 

Protein sequence

MLRSKKNILL FTFLVLINFQ SFSHPHMWFT SSLEVIFAGK TLKGAYVTWT FDRFFSADII 
SGYDLNGDGV FSAAETADVY ENAFSYTENY YYFTFIRQGE KRTSPEHIEK ASFSVWQNKG 
IVSYRFFIDL SGFKGQEIFL ACYDYTFFCD ITYPENTAAK FIYDKSLISP SYSIIENKNY 
PVYYDPLGAM DDNRIYYKWA PGLNTYYPKE VRIRF