| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0694 |
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| Symbol | pmpB/C-1 |
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| ID | 1246055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | + |
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| Start bp | 828157 |
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| End bp | 833175 |
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| Gene Length | 5019 bp |
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| Protein Length | 1672 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637061501 |
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| Product | polymorphic membrane protein B/C family protein |
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| Protein accession | NP_297068 |
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| Protein GI | 15835309 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat
[TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGTCTA TGAAATGGCT GTCAGCTACT GCTGTGTTTG CTGCTGTTCT TCCTTCAGTC
TCAGGGTTTT GTTTCCCGGA ATCTAAAGAA TTGAATTTCT CTCGCACAGG AACCTCTTCT
TCTACTACTT TTACAGAAAC TATTGGAGAG AACGGTACAG AATATATTGT CTCTGGTAAC
TCGTCATTTA CTAATTTCAC TAATATTCCA GTCAAAAAAC CAACGACTGA TGACTCAAGT
ACGTCAACCC CTACCACATC CTCTGCTGTA GATCCAACAG AAAAGATTGT CAGGGCCTCT
TCTTCATCTT CGCCTAATTC TGGGGATACG TCAGCTACTC CCGATCCTAA AGGTGGCGGA
GCTTTTTACA ATGAACACTC CGGAATTTTA TCTTTTATGG CAAGATCTGG AGTAGAAGGT
TCTCTCACTC TATCTAATAT CAAGATGACC GGTGATGGAG GAGCTATCTA TTCCCAAGGC
GAACTTCTAT TTACAGATCT AACTGGTTTA ACCATCCAAG GAAATCTATC CCAATTATCT
GGAGGAGGAA TCTTTGGAGG CTCTACTATT TCATTCTCTG GAATCAATCA AGCCACATTC
TCATCCAATA CTGCAGAAGT TGTCCCTGAA GAAACTACAC CGAACCCAAA TCCAGGAACT
CAAACAACAA CCTCACAACC ATCACCCACT TCCAAGGTCC AAAGTCTATT CACTTACTCT
TCATCTACTC AAGCTAATGG AAACGGTGCA GATTCTCAAA CTCCATCCCA TAAACCGGGA
TCTGGAGGAG CTATCTATGC CACAGGAGAT TTAACCATTT CCGACTCTCA AGAGATCGTT
TTCTCCGTAA ACAAAGCTAG TAAAGATGGA GGAGCCATCT TTGCAGAAAA AAATGTTTCT
TTCGAGAATA TCACAACACT AAAAGTACAA AACAATGGAG CAGAGGAAAA AGGAGGCGGT
ATCTATGCTA GTGGAGATCT GTCCATTCAG TCCTCTAAAC AAAGCCTTTT TAATTCCAAT
ACCAGCAAGC AAGGAGGCGG AGCTCTTTAT ATTGAAGGGA ATGTAGACTT CAAAGATCTC
GAAGAAATTC GCATTAAGTA CAATAAATCA GGAACTTTCG AAACAAAGAA AGTTACTTTA
TCGTTACCCG AAGCCCAGAC AAATAAAAGC TCTGTAACTG CTGCTTCCCA GTCTGGACCC
AATACTACAC CAACTCCTAC TCCTCCAGTC ACGGCTAAAG GTGGAGGTTT ATACACCGAA
AAAAATCTTT CCATCTCTAA TATTACAGGG ATTATTGAAA TTACTAACAA TAAAGCAACG
GATGTTGGAG GAGGAGCTTA CGTAAAAGGA ACACTCACTT GCAAAGATTC TCATCGCTTA
CAATTTCAGA AAAACTCTTC CGAGAAAAAA GGAGGAGGAC TTTACACAGA AGATACGATT
ACCTTATCTA ACCTGACAGG TAAAACTCTA TTCCAAGAGA ATACCGCTAA AGAGGAAGGT
GGGGGTCTTT ACATCCAAGG AGATGACAAA ACTTTAACCA TGACAGGACT CGATAGCTTC
TGTCTGATCG ATAACACTTC AGCAACCCAT GGTGGTGGAG CCTACGTCAC TAAAGAGATT
TCTCAAACTT ATACTTCCGA CGTTGAAGAG TTCCCTGGAA TCACTCCTGT GCATGGAGAA
ACAATCATCT CGGGGAATAA AGCTACTGGT GGTAGTGGTG GTGGAGTATG CACAAAGCAT
CTTGTTTTGT CCAATCTCCA AACCATCTCT ATATCCGAAA ATTTTGCATC AGAAAATGGT
GGTGGTGCCT GTACATGTCC AGATAATTTC CCTGCTCCTA CAGCATCTAC TCCTTCTACC
AATCAAACTG CCGCCCCTAA AGACGATAAA GACTTTTTAA TCGATTATGT TGTTAGCACA
ACGATCGACA AGAATAAGGC AACAAAAAAA GGTGCCGGTG TCTATGCTAA AAAAGCTAAA
CTATCCCGCA TAGACGAACT CAATATCTCC GATAACGCTG CTCAAGAAAC AGGAGGTGGC
TTCTGCTGTA CGGAATCTTT AGAATTGGAT ACCATCGCCT CTCTATCCGT AACTAAAAAT
CTTGCTGGGA AAGAAGGTGG AGGACTCCAC GCTAAAACAT TAAACATTTC TAATTTAAAA
TCAGGATTAT CTTTCTCAAA CAACACAGCG AACTCTTCTT CTACAGGAGT TGCAACGACC
GCAACTACAT CACAATCCCC TACAGTTTCC TCATTCTTAC CTCGAGCTAC TGCAGGAAGT
TCTCCAGCTC CTGCGCAAAC AACTCCAACT TATGCCGGAG TAGTAGGTGG AGCTATTTAC
GGAGAAACGG TTTCCTTCTC CAAATGTAGC GGACTGTGTC AATTTACAGA GAACTCTGCT
ATTGATAATA CTCCTTCTAG CCCCTCGCTA AATGTTCAAG GAGGAGCTAT TTATGCCAAA
ACATCGTTAT CCATAGAGGC AGAAGATCCT AGTACCTCTT ATGTCTTCTC TAAAAACTCT
GTCTCTACAG GGAAAGCGCA AACAACCGGT CAAATAGCTG GAGGAGCTAT CTACTCTCCT
TCAGTCACAT TAAACTGTCA AACAGTATTT TCCGGTAATA GCGCCTCTAT GGCAACAACA
AATCCCCCCT CCGGAACCTC GCCAAAAGAT ACTATTGGTG GAGCTATTGC AGGAACCACA
ATCTCCTTAT CTAAAACTTC TCATTTTTCG GAAAATACTG CTGATTTGGG AGCTGCTATA
GGAACCTTGT CAGGAGGGTC TTCATCCAAT CTTACGGAAA AAATTACCTT ATCGAACGGA
TCATTTACCT TTGAAAAAAA CAAAGCGAAT AAACGCGGAG TTATCTATGC TCCTAGCGTT
TCCATTAAAG GGAACAATAT TACCTTTAAC CAAAACACAT CTACTCATGA CGGAAGTGCG
ATCTACTTTA CTAAGGATGC AACAATTGAG TCTTTAGGAT CTGTTCTTTT TACAGGAAAC
AATGTGACTG CAGAACAGGC TAGCTCAACA GCAACTGGAG GACAAACCAC AAATACTACA
AATTATGGCG CGGCTATCTT TGGAGATCCT GGTACTCAAA CTACTGACAC CACATTAAAA
CTGATCGCTT CCTCCGGGAA TATTACTTTC AGTAATAACA GCCAAAATAC TGCCACAAAT
AACCCTGCCA CTAAGTTCTG TAGTATCTCA GGATACGTTA AGCTCACTTT ACAAGCAGCA
CAAGGGAAAA CGATCAGCTT TTTTGACAGC ATCCGAACTT CCACCAAGAA AACAGGTCAA
GCACAAAATA GTTACGAAAC TTTAGATATC AATAAAACAG AAAACAGTAA TACGTATGCT
GGGACTGTGT TATTCTCTTC CGAGCTCCAC GAAGTGAAAT CCTATGTGCC ACAAAACGTA
GTTCTCCATA ACGGGACATT AGTTCTTAAA AAGAATGCAG AGCTGCATGT AGTCTCTTTT
GAACAGAAAG AAGGCTCCAA ATTGATCATG GAACCCGGAG CAGTGTTATC TAACCAAAAT
ATAGCTAACG GAGCGTTGGC TATTAATGGA TTAACCATTG ACTTATCCAG TTTAGGAGCT
CCACAAACGG GAGAAGTCTT CTCCCCTCCT GAATTACGAA TTGTTGCAAC AACTTCTAAC
TCTGGAGGAG GTGGTGGAGT TGGAGGTTAT GTCACAGCCT CCAAAAATCT CTCCGCAGCA
TCCCCTACCG TTGCAGCTAC AAATCCAACC ATGGCAGACA ACAAAGTCTT CTTAACCGGC
GCTCTGACTT TGATCGATCC AGATGGAAAC TTTTACCAAA ATCCTATCTT AGGGACAGAT
TTAACCGATG TACCGTTAAT CAAACTCCCT ACAACAGCAA ATCAAGTTGA TGTTTCTAAC
TTAACACTAT CCGGAGACCT TTCTCCTAAG AAAGGGTATA CAGGAACCTG GACGCTAAAT
CCTGATCCAC AAACAGGAAA AGTTGTTGCC AACTGGAAAT TCGACATGTA CCGCCGTTGG
GAATACATAC CAAGAGATAA CCATTTCTAT GCCAATTCGA TCTTGGGCTC CCAAAACTCC
ATGATTGTTG TGAAACAAGG GCTTATTAAT AACATGTTAC ATAATGCCCG TTTCGATGAC
GCTGCTTACA ACAACTTCTG GGTCTCAGGA GTTGGAACTT TCCTATCGCA ACAAGGTACT
CCTCTTTCTG AAGAGTTTAG TTATTATAGC CGAGGAACTT CTGTAGCTAT CGATGCAAAA
CCACGACCAG ATTTTATCCT GGGAGCTGCT TTTAGTAAGA TGGTAGGAAG AACTAAAGCG
ATTAAGAAGG TACATAATTA TTCCCATAAG GGATCCGAAT ACTCATACCA AGCCTCTGTT
TACGGAGGTA AGTTCCTGTA CTTCTTACTT AATAAACAAC ATGGCTGGGC ACTACCCTTC
TTATTACAAG GGGTCGTATC CTATGGGCAT ATTAAGCATG ATACAACAAC CCTCTATCCT
TCTATCCATG AAAAAAATAA AGGAGACTGG GAAGATCTGG GTTGGTTAGT AGATCTACGC
GTCTCTATGG ATGTTAAAGA ACCTTCCAAG AGATCTTCTA AACGCGTTGC TCTTTACGGA
GAACTTGAGT ACTCCAGCAT TCGTCAGAAA TCATTCACGG AAATTGACTA CGATCCTCGA
CGCTTTGATG ATTGTGCTTA CAGAAACCTA TCGATTCCTA TGGGCTGCTA TTTTGAAGGG
GCTATCATGA GTTATGATAT TCTCATGTAT AACAAGCTTT CCTTAGCCTA TATGCCATCT
ATTTACAGAA ATAACCCTGT CTGTAAATAT TGGGTCCTAT CTTCGAATGA AACTAGCAAA
GTTGTCTGTG GAGTCCCCAC AAGAACATCC GCTCGAGCAG AGTATAGTAC ACAACTTTAT
CTAGGGCCCT TCTGGACCTT ATATGGGAAT TACACCATAG ACGTGGGTAT GTACACATTG
GCACAAATGA CGAGTTGTGG TGCCCGTATG ATTTTCTAA
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| Protein sequence | MSSMKWLSAT AVFAAVLPSV SGFCFPESKE LNFSRTGTSS STTFTETIGE NGTEYIVSGN
SSFTNFTNIP VKKPTTDDSS TSTPTTSSAV DPTEKIVRAS SSSSPNSGDT SATPDPKGGG
AFYNEHSGIL SFMARSGVEG SLTLSNIKMT GDGGAIYSQG ELLFTDLTGL TIQGNLSQLS
GGGIFGGSTI SFSGINQATF SSNTAEVVPE ETTPNPNPGT QTTTSQPSPT SKVQSLFTYS
SSTQANGNGA DSQTPSHKPG SGGAIYATGD LTISDSQEIV FSVNKASKDG GAIFAEKNVS
FENITTLKVQ NNGAEEKGGG IYASGDLSIQ SSKQSLFNSN TSKQGGGALY IEGNVDFKDL
EEIRIKYNKS GTFETKKVTL SLPEAQTNKS SVTAASQSGP NTTPTPTPPV TAKGGGLYTE
KNLSISNITG IIEITNNKAT DVGGGAYVKG TLTCKDSHRL QFQKNSSEKK GGGLYTEDTI
TLSNLTGKTL FQENTAKEEG GGLYIQGDDK TLTMTGLDSF CLIDNTSATH GGGAYVTKEI
SQTYTSDVEE FPGITPVHGE TIISGNKATG GSGGGVCTKH LVLSNLQTIS ISENFASENG
GGACTCPDNF PAPTASTPST NQTAAPKDDK DFLIDYVVST TIDKNKATKK GAGVYAKKAK
LSRIDELNIS DNAAQETGGG FCCTESLELD TIASLSVTKN LAGKEGGGLH AKTLNISNLK
SGLSFSNNTA NSSSTGVATT ATTSQSPTVS SFLPRATAGS SPAPAQTTPT YAGVVGGAIY
GETVSFSKCS GLCQFTENSA IDNTPSSPSL NVQGGAIYAK TSLSIEAEDP STSYVFSKNS
VSTGKAQTTG QIAGGAIYSP SVTLNCQTVF SGNSASMATT NPPSGTSPKD TIGGAIAGTT
ISLSKTSHFS ENTADLGAAI GTLSGGSSSN LTEKITLSNG SFTFEKNKAN KRGVIYAPSV
SIKGNNITFN QNTSTHDGSA IYFTKDATIE SLGSVLFTGN NVTAEQASST ATGGQTTNTT
NYGAAIFGDP GTQTTDTTLK LIASSGNITF SNNSQNTATN NPATKFCSIS GYVKLTLQAA
QGKTISFFDS IRTSTKKTGQ AQNSYETLDI NKTENSNTYA GTVLFSSELH EVKSYVPQNV
VLHNGTLVLK KNAELHVVSF EQKEGSKLIM EPGAVLSNQN IANGALAING LTIDLSSLGA
PQTGEVFSPP ELRIVATTSN SGGGGGVGGY VTASKNLSAA SPTVAATNPT MADNKVFLTG
ALTLIDPDGN FYQNPILGTD LTDVPLIKLP TTANQVDVSN LTLSGDLSPK KGYTGTWTLN
PDPQTGKVVA NWKFDMYRRW EYIPRDNHFY ANSILGSQNS MIVVKQGLIN NMLHNARFDD
AAYNNFWVSG VGTFLSQQGT PLSEEFSYYS RGTSVAIDAK PRPDFILGAA FSKMVGRTKA
IKKVHNYSHK GSEYSYQASV YGGKFLYFLL NKQHGWALPF LLQGVVSYGH IKHDTTTLYP
SIHEKNKGDW EDLGWLVDLR VSMDVKEPSK RSSKRVALYG ELEYSSIRQK SFTEIDYDPR
RFDDCAYRNL SIPMGCYFEG AIMSYDILMY NKLSLAYMPS IYRNNPVCKY WVLSSNETSK
VVCGVPTRTS ARAEYSTQLY LGPFWTLYGN YTIDVGMYTL AQMTSCGARM IF
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