Gene TC0673 details

Gene Information

• Locus tag: TC0673
• Symbol: hrcA
• ID: 1246034
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 803696
• End bp: 804874
• Gene Length: 1179 bp
• Protein Length: 392 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637061480
• Product: heat-inducible transcription repressor
• Protein accession: NP_297047
• Protein GI: 15835288
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.538731
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAATA GAACAGAAAT GTCCCAATTG CGAGCATCGA AAAAAGATTC TAAGATTTCG 
CATGTCCTAC TCATGGCCAT TAAGCTTTAT TTGGAAAGCG GTCAGCCCGT AGGATCGAAA 
CTTCTTAAAG AAACTTATTG TTCCGATCTA AGTTCGGCAA CGATACGGAA TTACTTTGCT 
CAACTGGAAA CAGACGGTTT TTTACGAAAA AACCATATCT CTGGAGGAAG AATTCCTACA 
GATCTGGCTT TCCGCTACTA TGCAGATCAT TGTTCTCCTG TTCTTGAACA AGAAGAAATC 
TCAATCATTC AACAAAAACT GAAAGAGCTT CCAGAATACA GCAAAAATAT TGTGAAAGAT 
CTACAGAAAG CTTCGGAAAT CCTTTCTGAG ATTTTACAAC TACCTGTTTG TTTCTCCTCT 
CCTCGTTTTG AAAGCGATTC TGTAACCAAT ATTCAACTAG TGTCTATAGA TGACCTACGA 
GTCGTTTTTG TACTCTCAAC AGAGTTTGGG CAACTTTTCA CGGATGTTCT TTGGCTCCCA 
GAACAACTTC CCGAAAACTC TTTGAAAAGA ATCGAAAGCT TTCTACAAAA TTATTTACGA 
AAGCATCCCT CCAGTGTCCC TCTTTCTCAA AAAGAGGAAG ATTTAGGTAT GACCCTATAT 
AACGAAGTTG TAGTCCGATA CCTCACTCGT TATTGCCATT TCAGTGAAGA AGATCTTTAC 
CAAACAGGAC TATCTAGATT ACTCAAATAC GAGGTCTTTA AAGATCCTGA AACACTCGCT 
CAGGGGCTTT CTTTCTTTGA AAACCGTAAA CACATGTGTC AGCTTTTAAA TTCTCATTTA 
CATAAAAAAG CTCCCACTAC GTTTATTGGC CGAGAACTCT CTGATATTGT TGGGAATGCA 
GACCCTTCAT GTGCAGTAAT TACCGTGCCT TACTACATGG ACCGCACTCC TTTGGGAGCA 
TTCGGTGTAC TAGGTCCTAT GAACCTCCCT TATCAACAGG TGTTTGGCAC ACTTTCTTTA 
TTCACAGAAC GACTAAAAAC GATTTTAACT CAAAGTTTTT ACAAATTTAA ATTATCTTTC 
AGGAGACCTT GTCCGACCGA CCCTAGATGT TCACAAAAAC CAGCAGAGTT GACTCGACGT 
TCTTCTATAA AATTATTACC AGCTAAGGAA TTAACATGA 

 

Protein sequence

MENRTEMSQL RASKKDSKIS HVLLMAIKLY LESGQPVGSK LLKETYCSDL SSATIRNYFA 
QLETDGFLRK NHISGGRIPT DLAFRYYADH CSPVLEQEEI SIIQQKLKEL PEYSKNIVKD 
LQKASEILSE ILQLPVCFSS PRFESDSVTN IQLVSIDDLR VVFVLSTEFG QLFTDVLWLP 
EQLPENSLKR IESFLQNYLR KHPSSVPLSQ KEEDLGMTLY NEVVVRYLTR YCHFSEEDLY 
QTGLSRLLKY EVFKDPETLA QGLSFFENRK HMCQLLNSHL HKKAPTTFIG RELSDIVGNA 
DPSCAVITVP YYMDRTPLGA FGVLGPMNLP YQQVFGTLSL FTERLKTILT QSFYKFKLSF 
RRPCPTDPRC SQKPAELTRR SSIKLLPAKE LT