Gene TC0570 details

Gene Information

• Locus tag: TC0570
• Symbol: rnc
• ID: 1245929
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 680743
• End bp: 681441
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637061375
• Product: ribonuclease III
• Protein accession: NP_296946
• Protein GI: 15835187
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCGTA CCGTAAATAT TCAGGCCGTA GAGTCTAAAT TAAAATTTAC ATTTTCTCAG 
CCACGGCTTC TCGTCACAGC TCTTACCCAT CCCTCGTATC GGAATGAGTT TCCTTCTGAC 
GGGGAAGATA GTGAGCGTTT AGAATTTCTT GGGGATGCTG TCTTAGGATT AGTCGTCACT 
GAACACCTTT TCCTCCTCTT CCCCTCTTTG AATGAAGGGC TTTTGTCAAC AACAAGATCA 
GCTTTGGTGA ATGCTGAAGC ATGTTTTAAC TATACGCAAA AATTATCTCT GGGCGAACAC 
CTCTTGATCG GTCGCGGTGA AAAAATGCAA AGTCATCGAG GAAAAATTTC TGCCTATGCC 
AACCTATTCG AGGCCATTTT AGGCGCTGTG TACTTAGATG GTGGACTAGC TCCCGCAAGA 
CAAATTATCG TTCCTTTACT TCCCAATAAA GAGGCTATAC TACCTCTAAT GCTAGTTAAT 
CCTAAAAATC GCTTACAACA ATTCACTCAG CAGACATTAA AGGTTCTTCC TACATATATC 
GCTCTTCCTT GGTCATCCGA AGATGGCACT CCTGGATACC ATGTACAAGT CTTCGTTAAT 
GAAAAACTTT GGGGAGAGGG CTTTGCTGGA TCAAAAAAGG AAGCAGAAAA ACTTGCAGCT 
AAACAGGCGT TATCAACACA TGACGACAAC AAAAATTAA 

 

Protein sequence

MQRTVNIQAV ESKLKFTFSQ PRLLVTALTH PSYRNEFPSD GEDSERLEFL GDAVLGLVVT 
EHLFLLFPSL NEGLLSTTRS ALVNAEACFN YTQKLSLGEH LLIGRGEKMQ SHRGKISAYA 
NLFEAILGAV YLDGGLAPAR QIIVPLLPNK EAILPLMLVN PKNRLQQFTQ QTLKVLPTYI 
ALPWSSEDGT PGYHVQVFVN EKLWGEGFAG SKKEAEKLAA KQALSTHDDN KN