Gene TC0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0512 
Symbol 
ID1245872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp618236 
End bp620614 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content39% 
IMG OID637061318 
Productouter membrane protein, putative 
Protein accessionNP_296889 
Protein GI15835130 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID[TIGR03303] outer membrane protein assembly complex, YaeT protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGGAA TACGAAAAAA AACGATTCTG CAACTCGCTA TTTTACTGTT GCTCCCCTTT 
TCACAAAACG CCTTTGGAAC ATCTCCTGAA GGACGTATGG TGGTACAATC CATCACTATT
GAGACTCGAG GAGAAAATGC TCAAAATAAG CGGGCTATTC CCAAAATAAA GACAAAGCAA
GGGACGCTGT TCTCTCAAAC TGATTTTGAC GAAGATCTAA GAACTCTCTC GAAAGATTTC
GACCGCATTG ATCCTATTGT AGAGTTTCGC AATGGGCAAG CTGTTATTTC CCTTATTCTG
ACAGCAAAAC CCGTTATCCG ACACATTAAC ATCTCAGGGA ATGAAGCAAT TCCTACTCAT
AAAATTTTAA AAACCCTAGA GCTTTATAAA AACGATCTTT TTGATCGAGA GGTTTTTTTC
AAAAATTTTG ATGCTTTAAG AACCCTTTAC TTAAAACGCG GATACTACGA TTCTCAATTG
TCCTATTCTC ACGATCATAA TGAGCAAGAA GGTTATATTG ATATCTCAAT CCAAATTAAA
GAAGGGCCCT ACGGACGGAT AAAAAAATTA ACAATTTCAG GTATTACTCG TACAGAAGCC
TCTGATTTGG GAGACATAGT TTTAACCAAA CAGTACTCTA CAACAACAAG TTGGTTCACT
GGAGCAGGGG TATACCATCC AGACATGGTG GACCAGGATC TCTTTGCCAT AACAAACTAT
TTTCAAAATA AAGGTTATGC AGACGCAAAA GTCACAAAAG AAGTCTCCAC AGATGCTAAA
GGAAACCTCT CTCTTGTTAT CAACGTAGAT AAAGGGCCCC TGTATACTTT AGGTCACGTA
CATATAGAAG GTTTCACAGC TTTATCCAAG CGGTTACTTG ATAAACAACT GTTAGTGGGC
CCCAATTCCT TATATTGCCC AGAAAAAGTT TGGGCTGGAG CTCAAAAAAT CCGTAATGCC
TACGCTAGAT ACGGATATGT AAATACCAAT GTAGACGTAT CTTTTGCTGT TCATCCAACG
CTCCCAGTTT ATGATGTTAC TTACAGGGTT AGCGAAGGAG CTCCTTACAA AATCGGACTA
ATCAAAATCA AAGGGAACAC ACACACCAAA CATGACGTAA TTTTACATGA GACAAGTCTG
TTCCCTGGAG ATACTTTTGA TAGATTAAAA CTAGAAGATA CGGAAACTCG ATTACGTAAC
ACAGGCTACT TTAAAAGTGT GAGTGTCTAC ACGGTACGCT CACAATTAGA TCCTTTGGAC
TCAAATAACC TTTATAGAGA CGTTTTCATT GAAGTCAAAG AAACCGAAAC AGGTAACCTA
GGACTGTTCT TAGGATTCAG TTCTATAGAC CATCTGTTCG GAGGAGCAGA AATTTCAGAA
AGCAATTTTG ATTTATTTGG CGCCCGACAC TTATTCAAAA AAGGGTTTAA ATCCTTAAGA
GGTGGTGGGG AATATCTTTT CTTAAAAGCC AATTTAGGAG ACAAAGTTAC TGATTATACT
GTTAAATGGA CAAAACCTCA TTTCTTAAAC ACCCCATGGA TCCTAGGAGT AGAATTAGAT
AAATCTATTA ATAAGGCTTT ATCAAAAGAT TATTCCGTTG ATACCTATGG AGGAAACATC
AGCACGACAT ACATTCTTAA CGACAAACTG AAATATGGGA TGTATTACCG CGGGAGCCAA
ACGAGCCTAA GTTTAAGAAA AAAAACAGAA AATCCTAACA AACCTGGACC AGATCTAGAT
AGTAACAAGG GATTTGTTTC CGCGGCAGGG CTTAACGTTC TTTACGATTC TATTGACAAT
CCTAGAAAAC CTACTATGGG TATTCGGAGC TCTTTGAACT TTGAGTTGTC TGGATTAGGA
GGAACCTATC AGTTTACAAA ATTAACAGCC AGCGGCTCTA TCTATCGCCT GCTAACTAAA
AAAGGTGTTT TGAAAATTCG TGGAGAAGCT AAGTTTATTA AACCTTTCGG TACAACCACA
GCCCAAGGAA TTCCTGTTAG TGAGCGCTTC TTCTTAGGAG GAGAATCTAC CGTTCGTGGA
TATAAACCAT TTATTATTGG GCCTAAATTT TCTCCAACAG AGCCTCAAGG GGGCTTATCT
TCCTTATTGC TAACAGAAGA GTTTCAATAT CCTCTAATTT CTCAACCCAG CATCAATGCA
TTCGTTTTTC TAGATTCGGG CTTTATTGGC ACGGAAGAGT ACACTATTCG ACTCAAAAAT
CTCTGTAGCA GTGCCGGATT TGGGTTGCGT TTTGATATGA TGAATAACGT GCCCATTATG
TTAGGTTGGG GTTGGCCTTT CCGCCCAACA GAAATTCTTA ATAATGAAAA AATTGATGTA
TCTCAAAGAT TCTTCTTCGC TTTGGGAGGA GTGTTCTAG
 
Protein sequence
MLGIRKKTIL QLAILLLLPF SQNAFGTSPE GRMVVQSITI ETRGENAQNK RAIPKIKTKQ 
GTLFSQTDFD EDLRTLSKDF DRIDPIVEFR NGQAVISLIL TAKPVIRHIN ISGNEAIPTH
KILKTLELYK NDLFDREVFF KNFDALRTLY LKRGYYDSQL SYSHDHNEQE GYIDISIQIK
EGPYGRIKKL TISGITRTEA SDLGDIVLTK QYSTTTSWFT GAGVYHPDMV DQDLFAITNY
FQNKGYADAK VTKEVSTDAK GNLSLVINVD KGPLYTLGHV HIEGFTALSK RLLDKQLLVG
PNSLYCPEKV WAGAQKIRNA YARYGYVNTN VDVSFAVHPT LPVYDVTYRV SEGAPYKIGL
IKIKGNTHTK HDVILHETSL FPGDTFDRLK LEDTETRLRN TGYFKSVSVY TVRSQLDPLD
SNNLYRDVFI EVKETETGNL GLFLGFSSID HLFGGAEISE SNFDLFGARH LFKKGFKSLR
GGGEYLFLKA NLGDKVTDYT VKWTKPHFLN TPWILGVELD KSINKALSKD YSVDTYGGNI
STTYILNDKL KYGMYYRGSQ TSLSLRKKTE NPNKPGPDLD SNKGFVSAAG LNVLYDSIDN
PRKPTMGIRS SLNFELSGLG GTYQFTKLTA SGSIYRLLTK KGVLKIRGEA KFIKPFGTTT
AQGIPVSERF FLGGESTVRG YKPFIIGPKF SPTEPQGGLS SLLLTEEFQY PLISQPSINA
FVFLDSGFIG TEEYTIRLKN LCSSAGFGLR FDMMNNVPIM LGWGWPFRPT EILNNEKIDV
SQRFFFALGG VF