| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0364 |
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| Symbol | sctW |
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| ID | 1245717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 423126 |
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| End bp | 424382 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637061165 |
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| Product | type III secreted protein SctW |
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| Protein accession | NP_296742 |
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| Protein GI | 15834983 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0863411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGCAT CCGGAGGAGC TGGAGGGTTA GGCGGAACCC AAACAGTAAA CGTAGCACAA
GCGCAAGCTG CAGCAGCTAC TCAGGATGCA CAAGAAATCA TAGGCTCTCA GGAAGCTTCT
GAAGCCAGTT TGATTAAAGG AAGTGAGGAT CTTGCTAATC CTGCTGCAGC GACTAGAATC
AAAAAGAAAG AAGACAAATT TCAGTCATTA GAAGCTCGTC GAAAAACAAC TAGTAAATCC
GAAAAAAAAT CAGAAAGTAC AGAAGAGAAA TCAGACTCTT CTCTTGAAGA GCGCTTCACA
GAAAATCTTT CGGATGTTTC TGGAGAAGAT TTTCGAGGGT TAAAGGATTC TCTGAGTGAA
GATTCCTCTC CTGAAGAGAT TCTTGAGAAG CTGTCAGGCA AATTTTCGGA CCCCACAATT
AAAGATCTTG CTCTAGACTT TCTGATTCAA TCGAGTCCTC CTGATGGGAA ATTAAGAGCC
TCTCTTATTC AGGCAAAACA GACGCTTTTT CAACAAAATC CTCAAGCAGT CAAAGGAGGG
CGCAACGTTC TTTTAGCATC AGAAGCCTTT GCTTCTAAAG CAAACACTTC CCCTGCATCA
TTACGCGCAT TGTATACCCA AGTAACCTCA TCTCCGGCTA ATTGTGCTTC TCTAAGTCAG
ATGCTATCCT CTTATTCTCC TACAGAAAAA GCAGCTGTTA TAGATTTTTT AACAAATGGT
ATGGTGTCTG ATCTCAAATC AGGAGGGCCT TCCATCCCTG CTCCACAATT GCAAGTGTAT
ATGACGGAGC TCAGCAATCT ACAAGCCCTC AACTCTGTAG ACAGTTTTTT TGACAAAAAT
ACAAAAGGAC TAGAAGACAA TTTAAAAGCC GAAGGACATA CCCTTCCACC ATCCCTAACT
CCCAGTAATC TTGCTCAAAC TTTTTTAAAG TTAGTGGAAG ATAAGTTCCC GTCCTCCCAA
AAAGCTCAAA AATTGTTGGA TGGCCTTGTT GGTTCTGACG TTACTCCTCA AACTGAAGTT
TTAAATCTCT TTTACCGAGC GCTCAATGGT TGTTCCCCAC GAATATTCGG CAATGCTGAG
AAAAAACAGC AGCTAGCAAC AGTAATTACT AACACATTAG ATACCGTGAA TGCCGATAAC
GAAGATTATC CTAAACCTAG CGATTTCCCC AAACCTTCCT TCCATGGCAC TCCTCCTCAT
GCTCCAGTGT CTCTATCTGA TATTCCATCA GCAACAACAA ACTCTGCAGA CCAATAA
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| Protein sequence | MTASGGAGGL GGTQTVNVAQ AQAAAATQDA QEIIGSQEAS EASLIKGSED LANPAAATRI
KKKEDKFQSL EARRKTTSKS EKKSESTEEK SDSSLEERFT ENLSDVSGED FRGLKDSLSE
DSSPEEILEK LSGKFSDPTI KDLALDFLIQ SSPPDGKLRA SLIQAKQTLF QQNPQAVKGG
RNVLLASEAF ASKANTSPAS LRALYTQVTS SPANCASLSQ MLSSYSPTEK AAVIDFLTNG
MVSDLKSGGP SIPAPQLQVY MTELSNLQAL NSVDSFFDKN TKGLEDNLKA EGHTLPPSLT
PSNLAQTFLK LVEDKFPSSQ KAQKLLDGLV GSDVTPQTEV LNLFYRALNG CSPRIFGNAE
KKQQLATVIT NTLDTVNADN EDYPKPSDFP KPSFHGTPPH APVSLSDIPS ATTNSADQ
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