| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0294 |
|---|
| Symbol | ffh |
|---|
| ID | 1246464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | + |
|---|
| Start bp | 352090 |
|---|
| End bp | 353436 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637061094 |
|---|
| Product | signal recognition particle |
|---|
| Protein accession | NP_296673 |
|---|
| Protein GI | 15834914 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATT CTTTATCGCA AAAATTATCT AGTATTTTCT CCTCACTTTT TACTGCAAAG
AGAGTAACAG AGGAGAGTAT TTCTGATTCC ATTAGAGAAA TTCGCCTAGC TCTTCTAGAT
GCTGATGTGA ATTATCAGGC GGTGAAAGAT TTTATATCCA AGGTAAAGCA GAAAGTCATT
GGGGAAGAGG TCTGGAAACA CGTATCCCCA GGACAACAGT TTGTGAAATG TTTGCATGAA
GAGCTTGCGG CTTTGCTTTC TTCACAACAG GCTAGTTTAT TGTTGCAGGG GCGTCCTGCG
GTTGTTTTAT TTTGTGGATT GCAGGGAGCG GGTAAGACGA CTACATGTGC CAAGCTTGCC
GACTACGTTC TTCGAGAGAA GAAAGCAAAA AAAGTGTTAG TGGCTTCTTG TGATTTAAAG
CGTTTTTCAG CAGTGGACCA GCTGGAGGGC TTAATAAAGC AAACTGGGGC AGATTTTTTC
CGAAAAAAAG GAGAAAATCC TGTGAGTATG GCATCAGAGG CGGTTCGCTA CGCAAAGGAT
CAAGGTTATG ATTTATTAAT CGTTGATACT GCTGGTCGAC TTCATGTGGA TGATGCATTG
ATGGATGAGC TGGTGGCCAT TGCTCGTGTA ACGAATCCGT CCGAAATCTT ATTCGTTATG
AATTTAGCGA TGGGCCAGGA TGCAGTAACT ACTGCGAAGG CTTTTGATGA GCGCTTAGGG
TTAACTGGTA TCGTCGTGTC CATGGCAGAT GGCGATGCTC GGGCTGGAGC AGTCTTATCA
GTGAAGTCTT TGCTTGGCAG ACCTATTAAA TTTGAAGGGT GTGGGGAAAA AATAAAAGAT
CTACGTCCTT TTAACGCACA GTCTATGGCT GAACGTATCC TAGGAATGGG AGATACAATA
AGTTTAGTTG ATAAGATGCG TGAGTGTGTC TCTGAAGAAG AGAACAAAGA GTTAGAAGAA
AAATTAACGA AAGCGACGTT TACTTATGAG GATTTTTATA AGCAAATGCG AGCTTTCCGT
CGTTTAGGGC CTTTGCGCAA AATCATGAAT ATGATGCCAA GCTTCGGTGG CATGAGGCCT
AGTGATAAGG ATTTGGAAGA ATCCGAGAAG CAAATGAAAA GAAATGAGGC GATTATTCTT
TCTATGACTC CAGAGGAAAG GAAGGAGTTG GTCGAACTGA ATATGAGCCG GATGAAAAGA
ATCGCTGCGG GCTGTGGCCT GACTTTAGGT GATGTAAATC AGTTCCGTAA GCAAATGATG
CAATCTAAGA AATTTTTTAA AGGGATGACC CGAGAAAAAA TGGAACAGAT GGGTAAAAAA
ATGTCTGGAG GGAATCTGTG GCGTTAA
|
|---|
| Protein sequence | MINSLSQKLS SIFSSLFTAK RVTEESISDS IREIRLALLD ADVNYQAVKD FISKVKQKVI
GEEVWKHVSP GQQFVKCLHE ELAALLSSQQ ASLLLQGRPA VVLFCGLQGA GKTTTCAKLA
DYVLREKKAK KVLVASCDLK RFSAVDQLEG LIKQTGADFF RKKGENPVSM ASEAVRYAKD
QGYDLLIVDT AGRLHVDDAL MDELVAIARV TNPSEILFVM NLAMGQDAVT TAKAFDERLG
LTGIVVSMAD GDARAGAVLS VKSLLGRPIK FEGCGEKIKD LRPFNAQSMA ERILGMGDTI
SLVDKMRECV SEEENKELEE KLTKATFTYE DFYKQMRAFR RLGPLRKIMN MMPSFGGMRP
SDKDLEESEK QMKRNEAIIL SMTPEERKEL VELNMSRMKR IAAGCGLTLG DVNQFRKQMM
QSKKFFKGMT REKMEQMGKK MSGGNLWR
|
|---|
| |