Gene TC0110 details

Gene Information

• Locus tag: TC0110
• ID: 1245640
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: -
• Start bp: 129214
• End bp: 129873
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637060903
• Product: hypothetical protein
• Protein accession: NP_296494
• Protein GI: 15834735
• COG category: [R] General function prediction only
• COG ID: [COG2940] Proteins containing SET domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.805691
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATTA GCTGCACTCA AGACACCCTA TATCTCTCTT TACATGGAGG GGTTGCCTCC 
GCCAACCCTT ATCCCATATC AAGAGTGGAG AAACTTTTAC AGTTCTCGTT TCTTCCCCAA 
CTTCAATTCC AAGATCCCGT AATAGAAAAA CGAATACAAC GACTATGTTA CCGAGAAGAA 
AAACGCCTAG CTATTTCCTC TTTAACAAAA TGGTTGGGGC AATTACATAA GCAGCAACTC 
CGAGCTCCTA CAATCCCTCC TGTTGCCATC TGTTGGATTG ATGCTCTTAT AGGATATGGA 
GTTTTTGCTC GCGAATTCAT TCCTGCATGG AGCTATATCG GGGAATACAC GGGAATTTTG 
CGTAGACGAC AAGCTCTTTG GTTAGATGAA AATGATTACT GCTTTCGCTA TCCAGTCCCC 
CGCCATTCCT TTCGATATTT TACCATCGAT AGTGGGAAGC TAGGGAACAT TACCCGCTTT 
ATTAATCACA GCGATAACCC CAACCTAGAA GCTGTTGGGG CTTTTGAAAA TGGCATATTC 
CATATTATTA TTCGGGCTAT CAAAGACATT TTTCCTGGAG AGGAACTCTG CTATCACTAC 
GGTCCGTTAT ATTGGAAACA CCGCAAAAAG CGAGAGGAGT TTATCCCTCA AGAAGAGTAA 

 

Protein sequence

MTISCTQDTL YLSLHGGVAS ANPYPISRVE KLLQFSFLPQ LQFQDPVIEK RIQRLCYREE 
KRLAISSLTK WLGQLHKQQL RAPTIPPVAI CWIDALIGYG VFAREFIPAW SYIGEYTGIL 
RRRQALWLDE NDYCFRYPVP RHSFRYFTID SGKLGNITRF INHSDNPNLE AVGAFENGIF 
HIIIRAIKDI FPGEELCYHY GPLYWKHRKK REEFIPQEE