Gene TBFG_13788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13788 
Symbol 
ID5224481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp4214895 
End bp4215614 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID640608561 
Productosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport system permease protein proZ 
Protein accessionYP_001289715 
Protein GI148824961 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones453 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones208 
Fosmid unclonability p-value0.991425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCC TGCAGCAGGC GCTGTCCTAC CTGCTAACCG CCAGTAACTG GACCGGTCCA 
GTCGGCTTGG CAGTCCGCAC GTGTGAGCAC CTGGAATACA CCGCGGTGGC GGTGGCCGCT
TCAGCACTGA TCGCCGTGCC AGTCGGGCTG CTTATCGGGC ACACCGGTCG CGGGACGCTG
CTGGTGGTGG GTGCGGTCAA TGGTTTGCGC GCTTTGCCCA CGTTGGGTGT TCTGCTGCTA
GGGGTGCTGC TATTCGGGCT GGGATTGGGG CCGCCGCTGG TGGCGCTGAT GCTGTTGGGT
ATCCCGTCTT TGCTGGCCAG CACGTACGCC GGCATTGCCA GTGTTGATCC GCTGGTGGTC
GATGCCGCCC GGGCGATGGG CATGACCGAG TCCCAGGTGC TGCTGCGCGT CGAGGTACCC
AATGCACTAC CGCTGATGCT CGGCGGACTA CGCAGCGCGA CGCTGCAAGT GGTCGCCACC
GCGACGGTGG CCGCCTACGC CAGTCTCGGG GGGCTGGGTG GCTACTTGAT CGACGGGATC
AAGGAGCGTC GATTCCACAT CGCTCTGGTC GGTGCGATGA TGGTGGCCGC GTTGGCGTTG
ACCCTCGACG GACTGCTGGC GTTGGCGGGG TGGGTATCGG TGCCGGGCAC CGGGAGGATG
CGCAAGCTCG CCGCGGTTGT CGACAAACCT GCCGCAGGCG GTGGACACGC CCTACGGTAG
 
Protein sequence
MNFLQQALSY LLTASNWTGP VGLAVRTCEH LEYTAVAVAA SALIAVPVGL LIGHTGRGTL 
LVVGAVNGLR ALPTLGVLLL GVLLFGLGLG PPLVALMLLG IPSLLASTYA GIASVDPLVV
DAARAMGMTE SQVLLRVEVP NALPLMLGGL RSATLQVVAT ATVAAYASLG GLGGYLIDGI
KERRFHIALV GAMMVAALAL TLDGLLALAG WVSVPGTGRM RKLAAVVDKP AAGGGHALR