Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13535 |
Symbol | |
ID | 5224224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 3932450 |
End bp | 3933214 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640608304 |
Product | integral membrane protein YrbE4a |
Protein accession | YP_001289462 |
Protein GI | 148824708 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 388 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 146 |
Fosmid unclonability p-value | 0.00000148357 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGATCCAAC AACTTGCGGT TCCGGCCCGG GCCGTCGGCG GGTTCTTCGA AATGTCGATG GACACCGCGC GTGCCGCTTT CCGGCGGCCG TTCCAGTTCC GCGAGTTTTT GGACCAGACC TGGATGGTGG CCCGCGTTTC GCTAGTCCCG ACGTTGCTGG TGTCCATTCC GTTCACGGTC CTGGTGGCGT TCACCCTCAA CATTCTGTTG CGTGAAATTG GGGCCGCCGA CTTGTCCGGC GCCGGAACGG CGTTCGGCAC CATCACCCAG CTGGGCCCGG TCGTGACTGT GCTGGTGGTG GCAGGTGCTG GCGCCACGGC GATCTGCGCC GACCTGGGCG CTCGCACCAT CCGTGAGGAA ATCGACGCGA TGCGGGTGCT GGGCATCGAC CCAATTCAAC GGCTCGTGGT CCCCAGGGTG TTGGCGTCCA CATTGGTTGC GCTGCTGCTC AACGGCTTGG TGTGCGCCAT TGGCCTGTCC GGCGGCTACG CGTTCTCGGT CTTTCTTCAG GGCGTCAACC CGGGTGCGTT TATCAACGGT CTGACCGTGC TCACCGGACT GCGCGAATTG ATACTGGCGG AGATCAAGGC GCTACTGTTC GGGGTCATGG CCGGGCTGGT CGGGTGTTAC CGCGGTCTGA CGGTCAAGGG TGGGCCCAAG GGGGTGGGCA ATGCGGTCAA CGAGACCGTC GTCTACGCGT TCATCTGCCT TTTCGTGATC AACGTAGTCA TGACCGCTAT AGGTGTGCGA ATCTCGGCGC AGTAA
|
Protein sequence | MIQQLAVPAR AVGGFFEMSM DTARAAFRRP FQFREFLDQT WMVARVSLVP TLLVSIPFTV LVAFTLNILL REIGAADLSG AGTAFGTITQ LGPVVTVLVV AGAGATAICA DLGARTIREE IDAMRVLGID PIQRLVVPRV LASTLVALLL NGLVCAIGLS GGYAFSVFLQ GVNPGAFING LTVLTGLREL ILAEIKALLF GVMAGLVGCY RGLTVKGGPK GVGNAVNETV VYAFICLFVI NVVMTAIGVR ISAQ
|
| |