| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13520 |
|---|
| Symbol | |
|---|
| ID | 5224209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 3916975 |
|---|
| End bp | 3917919 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640608289 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001289447 |
|---|
| Protein GI | 148824693 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 488 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 180 |
|---|
| Fosmid unclonability p-value | 0.0292785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGC GAGCGCCGCG AAACCTCGCC GTGAGTTCAC CTTCGGCGCA AGTGACGGGC
CGCATGGTCC AAAATGGCGA GAACCTGTTT CAGTTTCGGC GTGAGGGGCC TCAAGTGCAG
CTTTCTTTCC AAGACCGGAC CTACCTGGTC ACCGGAGGTG GCAGCGGAAT CGGCAAGGGG
GTGGCCGCCG GGTTGGTCGC GGCTGGAGCC GCCGTCATGA TCGTGGGACG AAATCCAGAC
AAGCTGGCGG CGGCTGTCAA AGACATCGAG GCGCTCAAGA CCGGAGCGAT CGGCTATGAG
CCGGCCGACA TCACCGACGA GGAGCAGACC CTGCGTGTGG TGGACGCGGC AACCGCGTGG
CATGGCCGGC TGCACGGTGT GGTGCATTGC GCGGGCGGGT CTCAGACCAT TGGGCCAATC
ACCCAGATCG ACTCGCAGGC CTGGCGGCGC ACCGTGGACC TCAATGTCAA TGGCACCATG
TACGTGCTCA AGCACGCCGC GCGGGAATTG GTACGCGGCG GCGGCGGTTC GTTCGTCGGC
ATCTCCTCGA TCGCGGCCAG CAACACCCAT CGCTGGTTCG GCGCCTACGG GGTCACCAAG
TCGGCCGTTG ACCACATGAT GAAACTGGCC GCTGACGAAC TCGGCCCGTC GTGGGTACGG
GTCAACAGCA TCCGCCCGGG CCTGATCCGT ACAGATCTGG TTGTGCCCGT CACAGAGTCG
CCGGAGCTGA GCGCGGACTA CCGGGTCTGC ACGCCATTAC CGCGGGTGGG TGAGGTCGAA
GACGTCGCGA ACCTAGCAAT GTTTTTGCTC AGCGACGCGG CCAGTTGGAT CACCGGACAG
GTCATCAACG TCGACGGCGG CCACATGCTG CGAAGGGGCC CGGACTTCTC GCCCATGCTG
GAGCCGGTGT TCGGCGCCGA CGGGCTGCGT GGAGTGGTCG GATAA
|
|---|
| Protein sequence | MNSRAPRNLA VSSPSAQVTG RMVQNGENLF QFRREGPQVQ LSFQDRTYLV TGGGSGIGKG
VAAGLVAAGA AVMIVGRNPD KLAAAVKDIE ALKTGAIGYE PADITDEEQT LRVVDAATAW
HGRLHGVVHC AGGSQTIGPI TQIDSQAWRR TVDLNVNGTM YVLKHAAREL VRGGGGSFVG
ISSIAASNTH RWFGAYGVTK SAVDHMMKLA ADELGPSWVR VNSIRPGLIR TDLVVPVTES
PELSADYRVC TPLPRVGEVE DVANLAMFLL SDAASWITGQ VINVDGGHML RRGPDFSPML
EPVFGADGLR GVVG
|
|---|
| |