| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13402 |
|---|
| Symbol | |
|---|
| ID | 5224091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 3790203 |
|---|
| End bp | 3790667 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640608171 |
|---|
| Product | tRNA/rRNA methylase spoU |
|---|
| Protein accession | YP_001289329 |
|---|
| Protein GI | 148824575 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 287 |
|---|
| Plasmid unclonability p-value | 0.00000000853607 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 197 |
|---|
| Fosmid unclonability p-value | 0.234298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGGC TGCTGTTCGT ATCTCCGCGT ATCGCCCCCA ACACCGGCAA CGCCATCCGG
ACGTGCGCCG CAACCGGCTG TGAACTGCAT CTGGTCGAGC CGCTCGGCTT CGACCTGTCC
GAACCCAAGC TGCGACGGGC CGGGCTGGAC TACCACGACC TGGCCTCGGT CACCGTTCAT
GCCTCGCTCG CGCACGCCTG GGAGGCGCTG TCGCCAGCGC GGGTGTTCGC CTTCACGGCG
CAGGCGACGA CGTTGTTCAC CAACGTCGGC TACCGGGCCG GTGACGTGTT GATGTTCGGG
CCCGAACCCA CCGGCCTGGA CGAGGCCACC CTGGCTGATA CGCACATCAC CGGGCAGGTG
CGCATTCCGA TGCTGGCGGG CCGGCGCTCG TTGAACCTGT CCAACGCCGC AGCCGTCGCG
GTCTACGAGG CCTGGCGTCA GCACGGCTTT GCCGGGGCGG TCTAG
|
|---|
| Protein sequence | MFRLLFVSPR IAPNTGNAIR TCAATGCELH LVEPLGFDLS EPKLRRAGLD YHDLASVTVH
ASLAHAWEAL SPARVFAFTA QATTLFTNVG YRAGDVLMFG PEPTGLDEAT LADTHITGQV
RIPMLAGRRS LNLSNAAAVA VYEAWRQHGF AGAV
|
|---|
| |