Gene TBFG_13295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13295 
Symbol 
ID5223984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3658673 
End bp3659587 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content69% 
IMG OID640608064 
ProductdTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD 
Protein accessionYP_001289222 
Protein GI148824468 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones324 
Plasmid unclonability p-value0.10261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones206 
Fosmid unclonability p-value0.625833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCA GGTCAGAAAG GCTAGTCATC ACCGGTGCGG GCGGGCAGCT GGGCAGCCAT 
CTGACGGCAC AGGCCGCCCG GGAAGGCCGC GATATGCTGG CGCTGACTTC CTCGCAGTGG
GATATCACCG ACCCCGCTGC GGCCGAGCGG ATCATCCGAC ACGGTGACGT GGTGATCAAT
TGCGCCGCCT ACACCGACGT CGACGGCGCC GAGAGCAATG AGGCAGTCGC CTATGCGGTC
AATGCCACTG GCCCGCAACA CCTCGCCCGT GCGTGCGCTC GTGTGGGTGC TCGGTTAATC
CACGTCTCCA CCGACTACGT ATTCGATGGC GACTTCGGCG GCGCCGAGCC CCGGCCCTAC
GAGCCCACCG ATGAAACCGC GCCGCAGGGC GTGTATGCCC GCAGCAAACT CGCCGGCGAG
CAGGCTGTGC TGGCAGCGTT CCCGGAGGCT GCCGTGGTAC GGACCGCCTG GGTCTACACC
GGCGGGACCG GCAAGGATTT CGTCGCCGTC ATGCGCCGGC TGGCCGCCGG ACACGGTCGG
GTGGATGTGG TCGACGACCA GACCGGGTCG CCGACCTACG TCGCCGACCT GGCCGAGGCG
CTGCTGGCGT TGGCCGACGC GGGCGTGCGC GGACGCGTGT TGCACGCCGC TAACGAGGGC
GTGGTCTCCC GGTTCGGTCA AGCCCGCGCG GTGTTCGAAG AATGCGGTGC CGACCCACAG
CGGGTGCGTC CGGTCAGCAG CGCGCAGTTT CCGCGGCCCG CGCCGCGTTC GAGCTATTCC
GCGCTGTCGA GCAGGCAGTG GGCGCTGGCG GGCTTGACGC CGCTACGGCA CTGGCGCAGC
GCACTGGCCA CGGCGCTGGC AGCACCTGCG AACTCAACTT CGATCGATCG ACGGTTACCC
TCAACGCGTG ACTGA
 
Protein sequence
MAGRSERLVI TGAGGQLGSH LTAQAAREGR DMLALTSSQW DITDPAAAER IIRHGDVVIN 
CAAYTDVDGA ESNEAVAYAV NATGPQHLAR ACARVGARLI HVSTDYVFDG DFGGAEPRPY
EPTDETAPQG VYARSKLAGE QAVLAAFPEA AVVRTAWVYT GGTGKDFVAV MRRLAAGHGR
VDVVDDQTGS PTYVADLAEA LLALADAGVR GRVLHAANEG VVSRFGQARA VFEECGADPQ
RVRPVSSAQF PRPAPRSSYS ALSSRQWALA GLTPLRHWRS ALATALAAPA NSTSIDRRLP
STRD