Gene TBFG_12925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12925 
Symbol 
ID5223611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3229868 
End bp3230743 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content69% 
IMG OID640607691 
ProductD-alanyl-D-alanine carboxypeptidase dacB2 
Protein accessionYP_001288854 
Protein GI148824100 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones390 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones204 
Fosmid unclonability p-value0.706875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGC TCATGACCGC GACCGCCGCG CTCTGTGCCT GCGCAGTCAC CGTCAGTGCG 
GGTGCCGCGT GGGCCGATGC CGACGTGCAG CCGGCCGGCT CCGTGCCGAT CCCCGATGGC
CCGGCTCAGA CCTGGATCGT GGCCGACCTC GATAGCGGTC AGGTGCTAGC CGGCCGCGAC
CAAAACGTGG CCCATCCGCC CGCGAGCACC ATCAAGGTGC TGTTGGCGCT GGTGGCACTC
GACGAGCTGG ACCTGAACTC CACGGTCGTC GCCGACGTCG CCGACACACA GGCCGAGTGC
AACTGCGTCG GCGTCAAACC GGGGCGCAGC TACACCGCGC GCCAGCTGCT CGACGGCCTG
TTGCTGGTGT CGGGCAACGA CGCCGCCAAC ACGTTGGCGC ACATGCTGGG TGGCCAAGAC
GTCACCGTGG CCAAGATGAA CGCCAAAGCC GCCACCCTAG GTGCGACGTC CACCCACGCG
ACGACGCCGT CCGGCCTAGA CGGACCCGGC GGCTCCGGGG CGTCCACCGC GCACGACCTG
GTGGTCATCT TCCGGGCCGC GATGGCCAAT CCGGTGTTCG CGCAGATCAC CGCCGAGCCC
TCGGCGATGT TCCCCAGCGA TAACGGCGAA CAGCTGATCG TCAACCAGGA CGAGCTGCTG
CAGCGGTACC CGGGCGCGAT CGGCGGCAAG ACGGGCTACA CCAACGCCGC TCGCAAGACG
TTCGTGGGTG CCGCCGCCCG CGGCGGCCGC CGCCTGGTGA TCGCCATGAT GTACGGGCTG
GTCAAAGAGG GCGGACCGAC GTATTGGGAT CAGGCTGCGA CCCTGTTCGA CTGGGGTTTC
GCCCTCAACC CGCAGGCCAG CGTCGGCTCG CTCTAG
 
Protein sequence
MRKLMTATAA LCACAVTVSA GAAWADADVQ PAGSVPIPDG PAQTWIVADL DSGQVLAGRD 
QNVAHPPAST IKVLLALVAL DELDLNSTVV ADVADTQAEC NCVGVKPGRS YTARQLLDGL
LLVSGNDAAN TLAHMLGGQD VTVAKMNAKA ATLGATSTHA TTPSGLDGPG GSGASTAHDL
VVIFRAAMAN PVFAQITAEP SAMFPSDNGE QLIVNQDELL QRYPGAIGGK TGYTNAARKT
FVGAAARGGR RLVIAMMYGL VKEGGPTYWD QAATLFDWGF ALNPQASVGS L