Gene TBFG_12724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12724 
Symbol 
ID5223409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3034350 
End bp3035387 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content63% 
IMG OID640607490 
ProductRNA polymerase sigma factor SigB 
Protein accessionYP_001288653 
Protein GI148823899 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones401 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones213 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAACTC AAAGTCCGGC TTTGTCGTTA AACCCCATGA CAGTGCAAGC CGATCGGGAG 
GTCGCTATGG CCGATGCACC CACAAGGGCC ACCACAAGCC GGGTTGACAG CGATCTGGAT
GCTCAAAGCC CCGCGGCGGA CCTCGTGCGC GTCTATCTGA ACGGCATCGG CAAGACGGCG
TTGCTCAACG CCGCCGGTGA AGTCGAACTG GCCAAGCGCA TAGAAGCCGG GTTGTATGCC
GAGCATCTGC TGGAAACCCG GAAGCGCCTC GGCGAGAACC GAAAACGCGA CCTGGCGGCC
GTGGTGCGTG ATGGCGAGGC GGCGCGCCGC CACCTGCTGG AAGCAAACCT GCGGCTGGTG
GTATCGCTGG CCAAGCGCTA CACGGGTCGG GGCATGCCGT TGCTGGACCT CATCCAGGAG
GGCAACCTGG GTCTGATCCG AGCGATGGAG AAGTTCGACT ACACAAAGGG ATTCAAGTTC
TCAACGTATG CCACGTGGTG GATCCGCCAG GCCATCACCC GCGGAATGGC CGACCAGAGC
CGCACCATCC GCCTGCCCGT ACACCTGGTT GAGCAGGTCA ACAAGCTGGC GCGGATCAAG
CGGGAGATGC ACCAGCATCT GGGTCGCGAA GCCACCGATG AGGAGCTCGC CGCCGAATCC
GGCATTCCAA TCGACAAGAT CAACGACCTG CTGGAACACA GTCGCGACCC GGTGAGTCTG
GATATGCCGG TCGGCTCCGA GGAGGAGGCC CCTTTGGGCG ATTTCATCGA GGACGCCGAA
GCCATGTCCG CGGAGAACGC GGTCATCGCC GAACTGTTAC ACACCGACAT CCGCAGCGTG
CTGGCCACTC TCGACGAGCG TGAGCACCAG GTGATCCGGC TGCGCTTCGG CCTGGATGAC
GGCCAACCAC GCACCCTGGA TCAAATCGGC AAACTATTCG GGCTGTCCCG TGAGCGGGTT
CGTCAGATCG AGCGCGACGT GATGAGTAAG CTGCGGCACG GTGAGCGGGC GGATCGGCTG
CGGTCGTACG CCAGCTGA
 
Protein sequence
MGTQSPALSL NPMTVQADRE VAMADAPTRA TTSRVDSDLD AQSPAADLVR VYLNGIGKTA 
LLNAAGEVEL AKRIEAGLYA EHLLETRKRL GENRKRDLAA VVRDGEAARR HLLEANLRLV
VSLAKRYTGR GMPLLDLIQE GNLGLIRAME KFDYTKGFKF STYATWWIRQ AITRGMADQS
RTIRLPVHLV EQVNKLARIK REMHQHLGRE ATDEELAAES GIPIDKINDL LEHSRDPVSL
DMPVGSEEEA PLGDFIEDAE AMSAENAVIA ELLHTDIRSV LATLDEREHQ VIRLRFGLDD
GQPRTLDQIG KLFGLSRERV RQIERDVMSK LRHGERADRL RSYAS