| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12607 |
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| Symbol | secD |
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| ID | 5223289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 2927332 |
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| End bp | 2929053 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640607369 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001288536 |
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| Protein GI | 148823782 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 273 |
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| Plasmid unclonability p-value | 0.455392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 210 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCATCGT CTTCGGCGCC GGTGCACCCT GCCCGTTACC TGTCGGTGTT CCTGGTGATG
CTGATCGGCA TCTATTTGCT GGTGTTTTTC ACCGGGGACA AGCACACCGC CCCCAAACTC
GGCATTGACC TGCAGGGCGG CACCAGGGTC ACGCTGACCG CGCGCACACC GGACGGCTCG
GCCCCGAGCC GGGAAGCGCT GGCACAGGCG CAGCAAATCA TCAGCGCGCG GGTCAACGGG
CTGGGAGTGT CCGGGTCGGA GGTGGTCGTC GACGGTGACA ACCTGGTCAT CACGGTGCCC
GGCAACGACG GCAGCGAGGC ACGCAACCTC GGACAGACCG CTCGGCTGTA CATCCGGCCG
GTGCTCAACT CGATGCCGGC GCAGCCCGCA GCCGAAGAAC CGCAGCCGGC ACCCAGCGCC
GAACCGCAGC CGCCCGGTCA ACCCGCCGCA CCGCCGCCAG CCCAATCGGG GGCGCCGGCT
TCACCGCAAC CTGGGGCCCA ACCGCGGCCC TATCCGCAGG ACCCGGCGCC ATCGCCCAAC
CCGACCTCAC CGGCCAGCCC GCCGCCGGCG CCGCCCGCTG AGGCGCCGGC CACGGATCCG
CGCAAGGATC TCGCCGAGCG CATCGCCCAG GAGAAGAAGC TGCGGCAGAG CACCAACCAA
TACATGCAGA TGGTTGCACT GCAATTCCAG GCGACCCGCT GCGAGAGCGA CGACATTTTG
GCCGGCAACG ACGACCCGAA ACTGCCGTTG GTGACCTGCT CGACCGACCA CAAGACCGCG
TACCTGCTGG CGCCGTCGAT CATCAGCGGC GACCAGATCC AAAACGCCAC CTCGGGTATG
GACCAGCGCG GCATCGGCTA CGTCGTCGAC CTGCAGTTCA AGGGTCCGGC GGCCAACATC
TGGGCCGACT ACACCGCCGC CCATATCGGC ACCCAGACGG CGTTCACCCT GGACTCGCAG
GTTGTCAGTG CACCGCAGAT CCAGGAAGCG ATCCCCGGCG GCCGAACCCA GATCAGCGGT
GGGGATCCGC CATTCACCGC GGCGACCGCA CGCCAGCTCG CCAACGTCCT CAAGTACGGG
TCGCTGCCGC TGTCCTTCGA ACCGTCGGAA GCCCAAACGG TTTCGGCGAC CTTGGGGTTG
TCATCGCTGC GCGCGGGCAT GATCGCGGGT GCGATCGGCC TGCTGTTGGT GCTGGTGTAT
TCGCTGCTCT ACTACCGAGT GCTGGGACTG CTCACGGCCT TGTCGCTAGT GGCTTCTGGC
TCAATGGTTT TTGCGATCCT GGTGCTCTTG GGCCGATATA TCAACTACAC CCTAGATCTG
GCTGGTATTG CGGGCCTGAT CATCGGTATC GGGACCACCG CCGACTCGTT CGTGGTGTTC
TTCGAACGCA TCAAAGACGA GATCCGCGAA GGCCGTTCGT TCCGGTCGGC AGTGCCGCGC
GGTTGGGCGC GTGCCCGCAA GACGATCGTG TCGGGCAACG CCGTCACTTT CCTGGCCGCT
GCCGTGCTGT ACTTTCTGGC GATCGGTCAG GTGAAGGGGT TCGCGTTCAC CCTGGGCCTC
ACCACGATCC TGGACCTCGT CGTGGTGTTC TTGGTGACGT GGCCGTTGGT GTATCTGGCG
TCCAAATCGT CGCTGCTGGC CAAGCCGGCA TACAACGGCC TGGGAGCGGT GCAGCAGGTC
GCACGCGAAC GCCGGGCCAT GGCTCGGACG GGACGGGGAT AG
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| Protein sequence | MASSSAPVHP ARYLSVFLVM LIGIYLLVFF TGDKHTAPKL GIDLQGGTRV TLTARTPDGS
APSREALAQA QQIISARVNG LGVSGSEVVV DGDNLVITVP GNDGSEARNL GQTARLYIRP
VLNSMPAQPA AEEPQPAPSA EPQPPGQPAA PPPAQSGAPA SPQPGAQPRP YPQDPAPSPN
PTSPASPPPA PPAEAPATDP RKDLAERIAQ EKKLRQSTNQ YMQMVALQFQ ATRCESDDIL
AGNDDPKLPL VTCSTDHKTA YLLAPSIISG DQIQNATSGM DQRGIGYVVD LQFKGPAANI
WADYTAAHIG TQTAFTLDSQ VVSAPQIQEA IPGGRTQISG GDPPFTAATA RQLANVLKYG
SLPLSFEPSE AQTVSATLGL SSLRAGMIAG AIGLLLVLVY SLLYYRVLGL LTALSLVASG
SMVFAILVLL GRYINYTLDL AGIAGLIIGI GTTADSFVVF FERIKDEIRE GRSFRSAVPR
GWARARKTIV SGNAVTFLAA AVLYFLAIGQ VKGFAFTLGL TTILDLVVVF LVTWPLVYLA
SKSSLLAKPA YNGLGAVQQV ARERRAMART GRG
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