Gene TBFG_12470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12470 
Symbol 
ID5223147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2755383 
End bp2756858 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content63% 
IMG OID640607227 
ProductC4-dicarboxylate-transport transmembrane protein dctA 
Protein accessionYP_001288399 
Protein GI148823645 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones231 
Plasmid unclonability p-value0.0000112965 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones201 
Fosmid unclonability p-value0.468054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CCTTGGATCG TGCGCCGGTC ACGGATTTGC CGGCTAACAA CAAAGGCCGA 
GACCGCACCC ACTGGCTGTA TCTCGCGGTC ATTTTCGCAG TGATAGCCGG TGTGATCGTG
GGGCTGACGG CGCCGTCGAC CGGAAAAAGC CTCACGGTGC TCGGGACGGT GTTCGTCAAC
CTGATCAAGA TGATGATCGC ACCGGTCATC TTCTGCACGA TCGTGCTCGG GATCGGCTCG
GTGCGCAAAG CCGCGGCCGT GGGCAAGGTC GGCGGGCTGG CTTTGGCCTA CTTTCTAACG
ATGTCATCGG TGGCGCTCGG GATCGGGTTG ATCGTCGGCA ACCTACTCAG TCCGGGTAGG
GATCTGCACC TTAGGCCTGG TGCGGTCGGA AGCGGCGCAG CATTGGCCGG CCAGGCTGCG
GAGTCACACG GAATCGCTGG GTTCATCCAG CAGATCATTC CGAGGTCGCT CCCCTCAGCC
CTTACTGAAG GCAACGTGCT GCAGGTGTTA CTCGTCGCGC TGCTGGTCGG TTTCGCGGTC
CAAGGCCTGG GCCCCGCAGG CGAGTCCATC CTGCGTGCCG TCGAGAACCT GCAAAAGCTG
GTGTTCAAGG TGCTCGTGAT GGTACTGTGG CTGGCTCCGA TCGGCGCGTT CGGTGCGATC
GCCAATATCG TCGCCACGAC TGGCTTCAAC GCCGTCACCA ACCTGCTGCT GCTGATGGCC
GGCTTCTACC TGACGTGCGT GGTGTTCGTT TTCGGCGTCC TGGGAGTGCT ACTGCGCATC
GTGTCGGGTT TGTCGATCTT TCGGCTGCTG CGCTATCTAG CCCGCGAGTA CTTGCTGATC
TTCGCAACAT CGTCGTCGGA GGTGGTGCTG CCCAGACTGA TCACCAAGAT GAAACACTTG
GGCGTGCAAT CCAGCACGGT CGGCGTGGTG GTGCCGACCG GCTACTCGTT CAATCTTGAC
GGCACCGCTA TCTATCTGAC CATGGCGTCG CTGTTCATCG CCGACGCGAT GGGACATCGC
TTGACATGGG GCGAGCAGAT CGCGCTGCTG GCGTTCATGA TCATCGCGTC CAAGGGCGCT
GCCGGGGTCA GCGGTGCGGG CCTTGCGACG CTGGCCGGCG GCCTGCAGGC TCATCGCCCC
GAGCTGCTGG ACGGTGTCGG GCTGATTGTG GGGATCGACC GGTTCATGTC GGAAGCCCGT
TCGCTCACGA ACTTCTCCGG CAACGCCGTC GCAACCATCC TGGTTGCCTC GTGGACAAAG
ACCATTGACC TGTCCAAAGC CGACGAGGTG TTGCGCGGTC GTGATCCCTT CGACGAATCG
ACCATGGTCG ATCCCCACGA TGAGGAGCCA CCCGCCGCCA CACCCCACGG GGGCGGCGTC
CCGACGAACC CTGCGCTGTG CGATTTCGAG CAGGTCAGTC TAGGCGGATT GGTGGGCCGG
CCGGCCGGCC CGCAACGCGC CGACGTGGAC GGGTAG
 
Protein sequence
MTAPLDRAPV TDLPANNKGR DRTHWLYLAV IFAVIAGVIV GLTAPSTGKS LTVLGTVFVN 
LIKMMIAPVI FCTIVLGIGS VRKAAAVGKV GGLALAYFLT MSSVALGIGL IVGNLLSPGR
DLHLRPGAVG SGAALAGQAA ESHGIAGFIQ QIIPRSLPSA LTEGNVLQVL LVALLVGFAV
QGLGPAGESI LRAVENLQKL VFKVLVMVLW LAPIGAFGAI ANIVATTGFN AVTNLLLLMA
GFYLTCVVFV FGVLGVLLRI VSGLSIFRLL RYLAREYLLI FATSSSEVVL PRLITKMKHL
GVQSSTVGVV VPTGYSFNLD GTAIYLTMAS LFIADAMGHR LTWGEQIALL AFMIIASKGA
AGVSGAGLAT LAGGLQAHRP ELLDGVGLIV GIDRFMSEAR SLTNFSGNAV ATILVASWTK
TIDLSKADEV LRGRDPFDES TMVDPHDEEP PAATPHGGGV PTNPALCDFE QVSLGGLVGR
PAGPQRADVD G