Gene TBFG_12338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12338 
Symbol 
ID5223015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2598075 
End bp2599592 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content65% 
IMG OID640607095 
Producthypothetical protein 
Protein accessionYP_001288269 
Protein GI148823515 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones362 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones243 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCGA ACCGGGGGAT CGATGAAGAC TTCCTGGACC TGCCGCGCCA GCAGTTGGCC 
GACGCCGCAT TGTCGGCGGC CGCCACGGCC GGGGCCAGCC ACGCCGACCT GCGGGTTCAC
CGCATTAGCA CCGAGATCAT CCAACTGCGT GACGGTGAGC TGGAGACCGC GGTGATCAGC
CGTGAGCTCG GCCTGGCCGT CCGGGTAATC GTCGCGGGCA CGTGGGGATT CGCCTCCCAT
GCTGAGTTGG CACCCGACGT CGCGGCCGCG ACCGCTCGCC ATGCGGTACA CGTGGCTACC
GTGCTGGCGG CGCTGAACAC CGAGCGGGTC AGATTGGCGC CCGAGCCCGT ATACACCGAC
GCGGAGTGGG TCTCGAACTA CCGGATCGAT CCGTTCGGCG TTCCCGCCTC CGAGAAGATC
GCCGTGCTGC GCGACTACTC CGGGCGGTTA CTGGACGCCG ACGGCATCGA CCACGTATCG
GCCAGCTTGA ACGCCGTCAA GGAGCAGACC TTCTACGCCG ACACCTTCGG GTCATCGATT
ACCCAACAGC GGGTGCGGCT GCTGCCGTGC CTGGATGCGG TTGCTGTTGA TTCCGCGGCG
GGCAACTTCG AATCGATGCG GACGTTGGCT CCGCCGACCG CCCGGGGCTG GGAAGTGGTG
GCCGGCGACG AGATCTGGAA CTGGACCGAC GAGCTCGCGC AGCTGCCATC GCTGTTGGCC
GAGAAGGTCC GAGCGCCTAG CGTGATGCCG GGGCCCACCG ACCTGGTGAT CGACCCCACT
AACCTATGGC TGACTATTCA CGAATCCATC GGCCACGCAA CCGAATACGA CCGTGCCATC
GGCTACGAGG CTGCCTATGC CGGGACATCG TTTGCCACCC CAGACAAACT CGGCACCCTG
CGCTACGGCT CGCCGGTGAT GAACGTGACC GCCGACCGTA CCGCCGAATT CGGCTTGGCC
ACCGTCGGTT ACGACGACGA GGGAGTGGCC GCGCAGAGCT GGGATCTAGT GCGTGACGGG
GTGTTCGTTG GTTACCAGCT CGACCGGGCG TTCGCCCCAC GGTTGGGGGA GCCACGTTCC
AACGGCTGCT CGTATGCCGA CTCGCCACAT CACGTGCCGA TCCAGCGGAT GGCCAACATA
TCGCTGCAGC CGGGCATCGA AGACCTCAGC ACCGCGGACC TGATCGGCCG GGTCGACGAC
GGGATCTATA TTGTCGGCGA CAAGTCATGG TCGATCGACA TGCAGCGCTA CAACTTTCAG
TTCACCGGCC AGCGTTTCTT CCGCATCCGA GGTGGCCAGC TGTACGGGCA GCTGCGTGAT
GTCGCCTATC AATCGAGCAC CACCGATTTC TGGAATGCCA TGGAAGCCGT GGGCGGGCCG
TCGACCTGGC GAATGGGCGG AGCCATCAAC TGCGGCAAGG CCCAGCCCGG CCAGGTTGCC
GCGGTCAGCC ATGGCTGTCC GTCGGCGTTG TTCCGGGGCG TCAATGTGCT CAATACTCGT
ACTGAAGGTG GTCGATGA
 
Protein sequence
MTPNRGIDED FLDLPRQQLA DAALSAAATA GASHADLRVH RISTEIIQLR DGELETAVIS 
RELGLAVRVI VAGTWGFASH AELAPDVAAA TARHAVHVAT VLAALNTERV RLAPEPVYTD
AEWVSNYRID PFGVPASEKI AVLRDYSGRL LDADGIDHVS ASLNAVKEQT FYADTFGSSI
TQQRVRLLPC LDAVAVDSAA GNFESMRTLA PPTARGWEVV AGDEIWNWTD ELAQLPSLLA
EKVRAPSVMP GPTDLVIDPT NLWLTIHESI GHATEYDRAI GYEAAYAGTS FATPDKLGTL
RYGSPVMNVT ADRTAEFGLA TVGYDDEGVA AQSWDLVRDG VFVGYQLDRA FAPRLGEPRS
NGCSYADSPH HVPIQRMANI SLQPGIEDLS TADLIGRVDD GIYIVGDKSW SIDMQRYNFQ
FTGQRFFRIR GGQLYGQLRD VAYQSSTTDF WNAMEAVGGP STWRMGGAIN CGKAQPGQVA
AVSHGCPSAL FRGVNVLNTR TEGGR