Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12187 |
Symbol | |
ID | 5222863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2431033 |
End bp | 2432565 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640606943 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase murF |
Protein accession | YP_001288120 |
Protein GI | 148823366 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 175 |
Plasmid unclonability p-value | 0.0000000000000169772 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 235 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGC TGACCGTCGC GCAGATCGCC GAGATCGTCG GGGGCGCAGT GGCCGATATC TCCCCGCAAG ACGCCGCGCA CCGCCGCGTC ACCGGGACCG TCGAGTTCGA CTCGCGCGCC ATCGGCCCGG GCGGGCTGTT CCTCGCCCTG CCGGGGGCGC GCGCCGACGG CCACGACCAT GCCGCGTCGG CGGTAGCCGC GGGCGCCGCC GTCGTGCTGG CCGCCCGCCC GGTGGGGGTG CCGGCCATCG TGGTTCCGCC AGTGGCCGCG CCGAACGTAT TGGCCGGCGT CCTCGAGCAC GACAACGACG GGTCGGGGGC GGCGGTGCTG GCCGCGCTGG CCAAGCTGGC CACCGCGGTG GCCGCGCAGT TGGTGGCCGG CGGGCTCACC ATCATCGGGA TCACCGGCTC GTCGGGCAAG ACGTCGACCA AGGACCTGAT GGCCGCCGTG CTGGCCCCGC TGGGGGAGGT GGTGGCCCCG CCCGGATCGT TCAACAACGA GCTGGGTCAC CCGTGGACGG TGCTGCGCGC GACGCGGCGC ACCGACTACC TGATTTTGGA GATGGCGGCA CGCCATCACG GCAACATCGC CGCGCTCGCC GAGATCGCGC CCCCGTCGAT CGGAGTCGTG CTCAACGTCG GCACCGCACA TTTGGGTGAG TTCGGCTCCC GCGAGGTCAT CGCACAGACC AAAGCCGAAC TGCCGCAGGC TGTTCCGCAT TCCGGAGCGG TCGTCCTCAA CGCTGATGAC CCCGCGGTGG CGGCGATGGC CAAGCTGACC GCGGCCCGGG TGGTGCGGGT CAGCCGGGAC AACACCGGTG ACGTTTGGGC GGGGCCGGTG TCGCTGGACG AATTGGCCAG GCCGCGCTTT ACGCTGCATG CCCACGATGC CCAAGCCGAG GTCCGACTCG GGGTCTGCGG CGACCACCAG GTCACTAACG CGCTGTGCGC CGCGGCGGTC GCGCTGGAGT GTGGGGCCAG CGTTGAACAG GTCGCGGCCG CGCTGACCGC GGCGCCGCCG GTGTCGCGGC ATCGGATGCA GGTGACCACC CGCGGCGACG GGGTGACGGT GATCGACGAC GCCTACAACG CCAACCCCGA CTCCATGCGG GCCGGGCTGC AGGCGCTGGC CTGGATCGCG CACCAACCCG AGGCCACCCG CCGCAGCTGG GCGGTGCTGG GTGAGATGGC CGAGCTGGGT GAGGACGCGA TAGCCGAGCA CGATCGCATC GGCCGGCTCG CGGTGCGCTT AGATGTGTCT CGACTCGTTG TCGTGGGAAC CGGGAGGTCG ATCAGCGCCA TGCACCACGG AGCGGTCCTG GAGGGGGCGT GGGGCTCGGG GGAAGCCACT GCTGATCACG GTGCGGATCG CACGGCCGTC AATGTGGCCG ACGGTGACGC CGCCCTGGCA CTACTGCGCG CCGAGCTGCG ACCCGGGGAT GTGGTCTTGG TCAAGGCCTC GAACGCGGCC GGGCTGGGTG CGGTGGCCGA TGCATTGGTC GCAGACGACA CATGCGGGAG TGTGCGCCCA TGA
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Protein sequence | MIELTVAQIA EIVGGAVADI SPQDAAHRRV TGTVEFDSRA IGPGGLFLAL PGARADGHDH AASAVAAGAA VVLAARPVGV PAIVVPPVAA PNVLAGVLEH DNDGSGAAVL AALAKLATAV AAQLVAGGLT IIGITGSSGK TSTKDLMAAV LAPLGEVVAP PGSFNNELGH PWTVLRATRR TDYLILEMAA RHHGNIAALA EIAPPSIGVV LNVGTAHLGE FGSREVIAQT KAELPQAVPH SGAVVLNADD PAVAAMAKLT AARVVRVSRD NTGDVWAGPV SLDELARPRF TLHAHDAQAE VRLGVCGDHQ VTNALCAAAV ALECGASVEQ VAAALTAAPP VSRHRMQVTT RGDGVTVIDD AYNANPDSMR AGLQALAWIA HQPEATRRSW AVLGEMAELG EDAIAEHDRI GRLAVRLDVS RLVVVGTGRS ISAMHHGAVL EGAWGSGEAT ADHGADRTAV NVADGDAALA LLRAELRPGD VVLVKASNAA GLGAVADALV ADDTCGSVRP
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