Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12185 |
Symbol | murD |
ID | 5222861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2428495 |
End bp | 2429955 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640606941 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_001288118 |
Protein GI | 148823364 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 187 |
Plasmid unclonability p-value | 0.000000000000362419 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 225 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGACC CTCTGGGGCC GGGTGCGCCC GTGTTGGTAG CCGGTGGCCG GGTGACCGGT CAGGCGGTGG CCGCGGTGCT GACTCGGTTT GGTGCGACGC CGACGGTGTG CGACGACGAT CCGGTCATGC TGCGACCGCA CGCCGAACGT GGGCTGCCGA CCGTTAGTTC CTCGGACGCG GTGCAGCAGA TAACCGGGTA TGCGCTGGTG GTCGCCAGTC CCGGCTTCTC GCCCGCAACC CCGCTACTGG CCGCGGCCGC GGCGGCGGGG GTGCCGATCT GGGGTGACGT GGAGTTAGCC TGGCGGCTAG ACGCAGCGGG CTGCTACGGA CCGCCGCGCA GCTGGCTGGT GGTGACCGGC ACCAACGGCA AGACCACCAC GACGTCGATG CTGCACGCCA TGCTGATCGC CGGTGGCCGC CGCGCCGTGC TGTGCGGCAA TATCGGCAGT GCGGTGCTGG ATGTGCTGGA CGAGCCGGCC GAGCTGCTGG CCGTGGAGTT GTCCAGTTTC CAGCTGCACT GGGCGCCGTC GCTGCGGCCC GAGGCCGGCG CGGTGCTCAA CATTGCCGAA GACCACCTGG ACTGGCATGC CACGATGGCC GAATACACCG CGGCCAAGGC CCGGGTGCTG ACCGGCGGGG TAGCGGTGGC CGGGCTGGAT GACAGCCGAG CGGCCGCACT GCTGGACGGC TCACCGGCGC AGGTGCGGGT CGGCTTCCGG CTCGGCGAGC CGGCCGCGGG GGAACTGGGC GTGCGCGACG CCCACCTGGT CGATCGCGCC TTCTCCGACG ACTTGACGCT GCTGCCGGTC GCGTCGATAC CGGTGCCAGG TCCGGTCGGC GTGCTTGACG CCCTGGCCGC GGCGGCGCTG GCCCGCTCGG TCGGGGTGCC CGCCGGTGCG ATCGCCGACG CGGTCACGTC GTTTCGAGTG GGCCGACACC GCGCCGAGGT GGTGGCCGTT GCCGACGGCA TCACCTACGT GGACGACTCC AAGGCCACCA ACCCGCACGC CGCGCGGGCT TCGGTGCTTG CATACCCGAG GGTGGTATGG ATCGCCGGTG GCCTGCTCAA GGGCGCGTCG CTTCACGCCG AGGTTGCGGC GATGGCGTCG CGGCTGGTCG GTGCGGTGCT GATCGGCCGG GATCGCGCAG CGGTTGCCGA GGCGTTATCA CGACACGCGC CCGATGTCCC AGTCGTTCAG GTTGTGGCAG GCGAGGATAC TGGTATGCCT GCGACTGTTG AGGTTCCTGT TGCTTGTGTT CTAGATGTGG CAAAAGATGA CAAAGCCGGT GAGACCGTTG GCGCTGCCGT GATGACCGCT GCGGTGGCCG CGGCCCGGCG GATGGCCCAA CCCGGTGACA CCGTGCTGCT GGCACCGGCC GGCGCCTCAT TCGACCAGTT CACCGGTTAT GCCGACCGGG GCGAGGCATT CGCGACCGCG GTCCGCGCGG TGATCCGGTA G
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Protein sequence | MLDPLGPGAP VLVAGGRVTG QAVAAVLTRF GATPTVCDDD PVMLRPHAER GLPTVSSSDA VQQITGYALV VASPGFSPAT PLLAAAAAAG VPIWGDVELA WRLDAAGCYG PPRSWLVVTG TNGKTTTTSM LHAMLIAGGR RAVLCGNIGS AVLDVLDEPA ELLAVELSSF QLHWAPSLRP EAGAVLNIAE DHLDWHATMA EYTAAKARVL TGGVAVAGLD DSRAAALLDG SPAQVRVGFR LGEPAAGELG VRDAHLVDRA FSDDLTLLPV ASIPVPGPVG VLDALAAAAL ARSVGVPAGA IADAVTSFRV GRHRAEVVAV ADGITYVDDS KATNPHAARA SVLAYPRVVW IAGGLLKGAS LHAEVAAMAS RLVGAVLIGR DRAAVAEALS RHAPDVPVVQ VVAGEDTGMP ATVEVPVACV LDVAKDDKAG ETVGAAVMTA AVAAARRMAQ PGDTVLLAPA GASFDQFTGY ADRGEAFATA VRAVIR
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