Gene TBFG_12171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12171 
Symbol 
ID5222846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2413937 
End bp2415289 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content65% 
IMG OID640606926 
Producthypothetical protein 
Protein accessionYP_001288104 
Protein GI148823350 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones347 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones203 
Fosmid unclonability p-value0.744068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTGA CAGATGAGAC CGGGGCTTCA AGCGACCACA GCGATGATGT CGCCCAGGTC 
GTCAGCAGGC TAATCCGGTT CGATACCACC AACAGTGGCG AACCCGGGAC CACCAAGGGT
GAGGCCGAGT GCGCACGCTG GGTCGCCGAG CAGCTCGCCG AAGTCGGCTA CCAACCTGAA
TACGTTGAAT CCGGTGCGCC CGGCCGCGGC AACGTGTTCG CCCGGCTGGC GGGCGCCGAT
AGTTCTCGCG GCGCGCTGCT GATCCACGGG CATCTCGATG TGGTGCCGGC TGAACCGGCC
GAATGGAGTG TGCACCCGTT TTCCGGCGCC ATCGAAGACG GCTACGTCTG GGGTCGTGGC
GCGGTCGACA TGAAGGACAT GGTGGGCATG ATGATTGTGG TTGCCCGCCA CCTTCGTCAG
GCCGCTATCG TGCCGCCACG GGATCTGGTG TTCGCGTTCG TTGCCGACGA GGAGCACGGC
GGCAAGTACG GGTCGCACTG GCTGGTCGAC AATAGGCCCG ATCTGTTCGA CGGCATCACC
GAGGCAATCG GTGAAGTCGG CGGTTTCTCG CTAACCGTGC CCCGGCACGA TGGTGGCGAA
CGTCGCCTGT ACCTGATTGA AACCGCCGAG AAGGGCATCC AGTGGATGCG GCTGACGGCA
CGCGGCCGGG CTGGGCACGG CTCGATGGTG CACGACCAGA ACGCGGTCAC CGCCGTTTGT
GAGGCGGTCG CTCGCCTAGG GCGCCACCAG TTTCCGCTGG TCTGCACTGA CACCGTCGCC
CAGTTCTTGG CCGTAGTCGG AGAGGAGACC GGACTGGCCT TCGACCTTGA CTCGCCGGAC
CTGGCCGGGA CGATCGACAA GCTTGGCCCG ATGGCCCGCA TGTTGAAGGC AGTGCTACAT
GACACCGCGA ACCCTACGAT GCTCAAGGCC GGATACAAGG CCAACGTCGT CCCGGCGACC
GCGGAGGCAG TTGTGGACTG CCGCGTGCTT CCGGGTCGCC GGGCGGCGTT CGAGGCCGAA
GTCGACGCGC TGATCGGACC CGACGTGACC CGGGAGTGGG TCAGCGATCT GCCATCATAT
GAGACCACCT TCGACGGTGA TCTGGTCGCC GCCATGAACG CCGCGGTGTT GGCGGTCGAC
CCAGACGGTC GCACGGTGCC GTACATGCTG TCCGGTGGAA CGGACGCGAA GGCGTTCGCG
CGCTTGGGTA TTCGGTGCTT TGGCTTCAGC CCGCTGCGCT TGCCGCCGGA CTTGGATTTC
ACCTCGTTGT TCCACGGCGT CGACGAGCGG GTACCCATCG ATGGGTTGCG GTTCGGCACC
GAGGTGCTAA CGCACTTGCT GACACACTGC TAG
 
Protein sequence
MTVTDETGAS SDHSDDVAQV VSRLIRFDTT NSGEPGTTKG EAECARWVAE QLAEVGYQPE 
YVESGAPGRG NVFARLAGAD SSRGALLIHG HLDVVPAEPA EWSVHPFSGA IEDGYVWGRG
AVDMKDMVGM MIVVARHLRQ AAIVPPRDLV FAFVADEEHG GKYGSHWLVD NRPDLFDGIT
EAIGEVGGFS LTVPRHDGGE RRLYLIETAE KGIQWMRLTA RGRAGHGSMV HDQNAVTAVC
EAVARLGRHQ FPLVCTDTVA QFLAVVGEET GLAFDLDSPD LAGTIDKLGP MARMLKAVLH
DTANPTMLKA GYKANVVPAT AEAVVDCRVL PGRRAAFEAE VDALIGPDVT REWVSDLPSY
ETTFDGDLVA AMNAAVLAVD PDGRTVPYML SGGTDAKAFA RLGIRCFGFS PLRLPPDLDF
TSLFHGVDER VPIDGLRFGT EVLTHLLTHC