Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11669 |
Symbol | |
ID | 5222349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 1859123 |
End bp | 1860772 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640606429 |
Product | PE-PGRS family protein |
Protein accession | YP_001287614 |
Protein GI | 148822860 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 157 |
Plasmid unclonability p-value | 8.43838e-17 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 196 |
Fosmid unclonability p-value | 0.300456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCT TACTCGTGGA GCCGGACTTG GTCACAGCAG CGGCCGCCAA TTTAGCTGGT ATTCGCTCGG CACTGAGCGA AGCCGCTGCC GCCGCATCGA CCCCCACGAC CGCGCTGGCA TCGGCCGGCG CCGATGAGGT GTCGGCGGCT GTCTCGCGAC TATTCGGCGC CTACGGTCAG CAATTTCAAG CGCTCAACGC CCGGGCGGCG ACGTTTCACG CCGAGTTCGT GAGCTTGTTG AACGGCGGCG CGGCGGCCTA TACCGGCGCC GAGGCCGCCA GCGTGTCGTC GATGCAGGCC CTGCTCGACG CGGTGAATGC GCCCACGCAG ACGCTGCTGG GGCGCCCACT GATCGGCAAC GGCGCCGATG GAGTGGCGGG GACCGGGTCA AATGCCGGCG GCAACGGCGG GCCCGGTGGA ATTTTGTACG GCAACGGCGG CAACGGCGGG GCCGGCGGTA ACGGCGGGGC CGCCGGATTG ATCGGCAACG GCGGCGCCGG CGGCGCCGGC GGTGCTGGAG GTGCAGGCGG CGCTGGCGGG GCCGGCGGCA CCGGCGGACT GTTGTATGGC AACGGCGGTG CCGGCGGCAA CGGGGGCAGT GCCGCTGCGG CCGGTGGGGC CGGCGGCAAC GCCCTGCTGT TCGGCAACGG CGGGAACGGC GGAAGTGGGG CTTCCGGCGG AGCCGCCGGC CACGCCGGGA CGATATTTGG TAACGGCGGC AATGCTGGGG CCGGATCGGG GCTAGCCGGC GCGGACGGCG GGTTGTTCGG CAATGGCGGG GACGGTGGTT CCAGCACCTC GAAGGCTGGC GGTGCAGGTG GAAATGCACT GTTCGGCAAC GGCGGGGACG GCGGATCGAG CACCGTCGCC GCCGGGGGTG CGGGCGGGAA TACCCTGGTC GGCAATGGCG GTGCCGGCGG CGCTGGCGGC ACCAGCGGTC TCACCGGTAG CGGCGTGGCC GGCGGGGCCG GCGGCAGCGT CGGCCTGTGG GGCTCCGGCG GTGCCGGCGG CGACGGCGGC GCCGCCACGT CATTGTTGGG CGTCGGCATG AACGCCGGCG CTGGCGGGGC CGGCGGCAAC GCCGGCCTGC TGTACGGCAA CGGCGGTGCC GGTGGGGCCG GCGGCAATGG TGGGGATACG ACGGTGCCAT TGTTCGACTC CGGCGTCGGC GGTGCCGGGG GTGCTGGCGG CAACGCCAGC TTGTTCGGTA ACGGTGGGAC CGGTGGCGTC GGCGGCAAGG GGGGGACGAG CAGCGATCTG GCCAGCGCTA CCAGCGGAGC CGGCGGGGCC GGCGGGGCCG GCGCGTCGGC GGGCTGCTCT ACGGCAACGG CGGGAACGGG GGGGCCGGTG GCATCGGCGG GGCTGCTATC AACATACTCG CCAACGCCGG TGCCGGCGGC GCCGGTGGTG CCGCGGGCAG TAGCTTCATC GGCAATGGCG GCAACGGTGG GGCCGGTGGC GCCGGTGGGG CTGCAGCGCT ATTTAGCTCC GGTGTCGGCG GTGCCGGCGG CAGCGGCGGC ACCGCGTTGC TTCTCGGCAG CGGTGGGGCC GGTGGGAACG GCGGCACTGG TGGGGCTAAC TCTGGCTCCC TCTTCGCAAG TCCCGGCGGT ACCGGCGGTG CCGGCGGTCA CGGCGGTGCC GGCGGGCTGA
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Protein sequence | MSFLLVEPDL VTAAAANLAG IRSALSEAAA AASTPTTALA SAGADEVSAA VSRLFGAYGQ QFQALNARAA TFHAEFVSLL NGGAAAYTGA EAASVSSMQA LLDAVNAPTQ TLLGRPLIGN GADGVAGTGS NAGGNGGPGG ILYGNGGNGG AGGNGGAAGL IGNGGAGGAG GAGGAGGAGG AGGTGGLLYG NGGAGGNGGS AAAAGGAGGN ALLFGNGGNG GSGASGGAAG HAGTIFGNGG NAGAGSGLAG ADGGLFGNGG DGGSSTSKAG GAGGNALFGN GGDGGSSTVA AGGAGGNTLV GNGGAGGAGG TSGLTGSGVA GGAGGSVGLW GSGGAGGDGG AATSLLGVGM NAGAGGAGGN AGLLYGNGGA GGAGGNGGDT TVPLFDSGVG GAGGAGGNAS LFGNGGTGGV GGKGGTSSDL ASATSGAGGA GGAGASAGCS TATAGTGGPV ASAGLLSTYS PTPVPAAPVV PRAVASSAMA ATVGPVAPVG LQRYLAPVSA VPAAAAAPRC FSAAVGPVGT AALVGLTLAP SSQVPAVPAV PAVTAVPAG
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