| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11405 |
|---|
| Symbol | |
|---|
| ID | 5222084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 1553489 |
|---|
| End bp | 1554982 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640606164 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001287350 |
|---|
| Protein GI | 148822596 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3482] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 242 |
|---|
| Plasmid unclonability p-value | 0.000176066 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 202 |
|---|
| Fosmid unclonability p-value | 0.617932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCT GCGGCAGGAT TGTCGTCACC GCTGGGCCCA CGATTAGCGC CGCGGACATC
CGCTCGGTGG TGCCGGATGC CGAGGTGGCG CCGCCGATTG CGTTTGGCCA GGCGCTCTCC
TATGACTTGC GGTCGGGTGA CACGCTGCTG ATTGTCGACG GATTGTTCTT TCAGCAGCCG
TCGGTTCGAC ATAAGGAGCT TTTGACGTTG ATGGCCGACG GTGTCCGAGT CGTCGGATCG
TCGAGCATGG GCGCCCTGCG GGCCGCTGAG CTGCATCCAT TCGGCATGGA GGGCTATGGC
TGGGTCTTCG AAAGCTACCG AGATGGGGTA CTCGAGGCCG ACGATGAGGT CGGCGTGGTG
CACGGCGACG CCGACGACGG CTACCCGGTC TTCGTCGACG CGCTGGTGAA CATGCGCCAC
ACCCTGGCGC GGGCCGTCGC AACTGGTGTG GTGTGCTCCG AGCTGGCCGA GCGGATCATC
GAGACCGCGC GGGCCACACC GTTCACCATG CGCACCTGGG CGCGGCTGCT GAGTGAGGTC
GGCGCCCCGG ACCAGCGCGG CCTCGCCGCA CAGTTGCGGT CACTGCGGGT CGATGTCAAA
CACGCCGATG CGCTGCTGGC GTTGCGGCAG CTCGGCCAGC GCCCCCGGGT GGAGCCGCTT
CGTCCGGGTC CGCCGCCCAC CGTGTGGTCG CGGCGGTGGC GGCAGCGATG GGCACCGCCC
ACCTCCGTCG CCGCATCGGC CGACCACGGC GAGTCTTTTG TCGACGTCAC CGACTTGGAG
GTCTTGTCGT TTTTGAGCGT GAGCTCGGTT GACTACTGGG CCTACCGGCC AGCACTGCAA
CAGGTCGCTG CCTGGTACTG GACGTTGAAA CACCCCGAAC AATCCGGAAG CGTCGGTGAG
CGTGCCGCAC GAGCCGTCGC CGAGGTGGCA TCGGAGGGCT ACGGGCGCGC CCTGGAATTC
ATTGCCTATC GCTACGCACT TGCCACCGGC ATCATCGACG AGACCGGCTT TCCCGAGGCG
GTCGCAGCGC ATTGGCTCAC CACCGAAGAG CGCCACGGCC TGGGCAATGA CCCCATCTCG
ATCTCGGCGC GAGTGATCAC CCGCACGTTG TTCGTCGTCC GGTTATTGCC GGCGATCGAC
CATTTCCTTG ACCTGCTGCG GAAGGACTCC CGACTGCCCC GATGGCGTGC CATGGCGGCC
CACGCACTCT GCAAGCGCGA CGATCTGGCC CGGCAAAAGC CGCACCTGAA CCTGGGCCGG
CCCGATCCGA CGCAATTGAA GCGCCTCTTT GGGGCCCGAT GGGGGACCCA GGTGAACCGC
ATCGAGTTGG CCCGGCGTGG ACTGATGACC GAGGACGCCT TCTATGCTGC CGCCACCCCG
TTCGCCGTCG CGGCCGTCGA CGACCAACTG CCGCGCATCG AGGTCGGCAC CTTAGGACCC
GCGCCGCTGA GCGCGGACGT TCCAGAACGC CATTTCGACT TCGGTTCCGT CTAA
|
|---|
| Protein sequence | MTACGRIVVT AGPTISAADI RSVVPDAEVA PPIAFGQALS YDLRSGDTLL IVDGLFFQQP
SVRHKELLTL MADGVRVVGS SSMGALRAAE LHPFGMEGYG WVFESYRDGV LEADDEVGVV
HGDADDGYPV FVDALVNMRH TLARAVATGV VCSELAERII ETARATPFTM RTWARLLSEV
GAPDQRGLAA QLRSLRVDVK HADALLALRQ LGQRPRVEPL RPGPPPTVWS RRWRQRWAPP
TSVAASADHG ESFVDVTDLE VLSFLSVSSV DYWAYRPALQ QVAAWYWTLK HPEQSGSVGE
RAARAVAEVA SEGYGRALEF IAYRYALATG IIDETGFPEA VAAHWLTTEE RHGLGNDPIS
ISARVITRTL FVVRLLPAID HFLDLLRKDS RLPRWRAMAA HALCKRDDLA RQKPHLNLGR
PDPTQLKRLF GARWGTQVNR IELARRGLMT EDAFYAAATP FAVAAVDDQL PRIEVGTLGP
APLSADVPER HFDFGSV
|
|---|
| |