Gene TBFG_11271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11271 
Symbol 
ID5221948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1391565 
End bp1392395 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID640606025 
Productshort-chain type dehydrogenase/reductase 
Protein accessionYP_001287216 
Protein GI148822462 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones287 
Plasmid unclonability p-value0.0000317139 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones170 
Fosmid unclonability p-value0.0033897 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGGGGT TCGCCGGAAA GGTCGCCGTT GTCACCGGCG CGGGATCGGG CATCGGGCAG 
GCGCTGGCAA TCGAGCTGGC CCGCTCGGGC GCCAAGGTGG CCATCAGCGA CGTCGACACC
GACGGCCTGG CAGACACCGA GCACCGGCTA AAGGCGATCA GCACGCCGGT CAAGACGGAC
CGACTCGACG TAACCGAACG CGAAGCCTTC CTAGCCTACG CCGATGCGGT CAACGAGCAC
TTCGGCACTG TGAACCAGAT CTACAACAAC GCCGGCATCG CCTTTACCGG CGATATCGAG
GTCAGCCAGT TCAAGGACAT CGAACGGGTG ATGGACGTCG ATTTTTGGGG TGTGGTCAAC
GGCACCAAGG CGTTCCTGCC GCATTTGATC GCCTCCGGGG ACGGCCACGT CATCAACATC
TCCAGCGTGT TCGGGTTGTT TTCGGCGCCG GGTCAGGCGG CCTACAACTC GGCCAAGTTC
GCCGTCCGCG GCTTTACCGA GGCGCTGCGC CAGGAAATGG CGTTGGCGGG TCACCCGGTG
AAGGTGACGA CGGTGCACCC CGGCGGTGTC AAGACCGCGA TCGCCCGTAA CGCCACCGCC
GCCGAGGGAC TTGACCAGGC CGAGCTGGCC GAGACGTTCG ATAAGCGGGT GGCCCATCTC
AGCCCACAGC GGGCCGCGCA GATCATCCTG ACGGGGGTGG CCAAGAACAA GGCCCGGGTG
TTGGTGGGTG TCGACGCCAA GGTACTGGAC CTGGTGGTCC GGCTGACCGG TTCCGGATAT
CAGCGGATCT TTCCGATCAT CACCGGCCGG TTGATACCCC GCCCGCGCTG A
 
Protein sequence
MEGFAGKVAV VTGAGSGIGQ ALAIELARSG AKVAISDVDT DGLADTEHRL KAISTPVKTD 
RLDVTEREAF LAYADAVNEH FGTVNQIYNN AGIAFTGDIE VSQFKDIERV MDVDFWGVVN
GTKAFLPHLI ASGDGHVINI SSVFGLFSAP GQAAYNSAKF AVRGFTEALR QEMALAGHPV
KVTTVHPGGV KTAIARNATA AEGLDQAELA ETFDKRVAHL SPQRAAQIIL TGVAKNKARV
LVGVDAKVLD LVVRLTGSGY QRIFPIITGR LIPRPR