Gene Synpcc7942_B2630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2630 
Symbol 
ID3772750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp20808 
End bp21608 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content57% 
IMG OID637798379 
Productsulfonate ABC transporter, permease protein, putative 
Protein accessionYP_398727 
Protein GI81230349 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.312135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTA GCCTGCGATC GCGCCACCGT TGGTTTTCCG CTCTGCAGCA ACTGGCTCAG 
AGCATTCCCT ACCCACTCCG CGGACTGCTA CTGGGGCTAT TGCTCTGGAG TACTTTGACC
TCCGCTTGGA TCAATCCTGA TCCGGTGTGG CAGGCCTTTG CCCCGGAATC CGCGATCGCA
GCCTTAGGCA AACTGCTGTT CAATGGCACC CTCTGGCCGC ACATTGGCGC TAGCCTCCAA
CGAGTAGCCG TAGGCTTATT GGCCGCGATC GCCGTCGGGG TTCCGGTTGG CTTGCTGTTT
GGGCTGGTAC CCATGATCGA GCGATCGGCC TCGGGGGCGT TGCAGTTCAT CCGCATGATC
TCGCCCCTGT CTTGGATGCC CATTGCCGTT ATGGCCTTTG GCATTGGCGA TCTGCCCGTT
TATTTTCTGC TAGCGATCGC AGCGGTCTGG CCAATTCTAC TCAGCACCAG CAGCGGTACT
GCGGCTGTTA ACCACAAGCT CTTACTTCTA GCTCGTAGCC TTTGTGCCAC TCGCAGTGAA
ACGATTCGGC GCATCGTGAT TCCTGCGATC GTGCCGCAAA TCCTTGTGGG TGTTCGACTC
GCGATCGGCA CGATCTGGAT TGTGCTCGTC CCCGCTGAGA TGCTGGGCGT TAGCTCAGGC
CTCGGTTACT TCATTCTTGA TACCCGCGAT CGCATTGCCT ATAACGAACT TACCGCTGTT
TTATTAGCGA TCGGCATCAT TGGCTGCGCC CTAGATTGGA GCCTGCAATT CCTGCAAAAG
TACTGGCAAC CCAGTCGCTA A
 
Protein sequence
MTISLRSRHR WFSALQQLAQ SIPYPLRGLL LGLLLWSTLT SAWINPDPVW QAFAPESAIA 
ALGKLLFNGT LWPHIGASLQ RVAVGLLAAI AVGVPVGLLF GLVPMIERSA SGALQFIRMI
SPLSWMPIAV MAFGIGDLPV YFLLAIAAVW PILLSTSSGT AAVNHKLLLL ARSLCATRSE
TIRRIVIPAI VPQILVGVRL AIGTIWIVLV PAEMLGVSSG LGYFILDTRD RIAYNELTAV
LLAIGIIGCA LDWSLQFLQK YWQPSR