Gene Synpcc7942_2605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2605 
Symbol 
ID3775202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2687378 
End bp2688034 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID637801059 
Producthypothetical protein 
Protein accessionYP_401622 
Protein GI81301414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.103693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTG GATCCCAGGC ATTCGGCCAA GCCTTTCCCT CTGACAACTT CCCAGAACAG 
CCCCAGGCTG CTGCGTCGCC ACAACCTGCG CGAGCAGATA AGGTCGATCA GCAAGTAGTT
GCCGTACGGC GCGCCCTAGG GGAGCACTTA GTCTTGGGCG GCTTTTTGAC GAACCTTCAA
CTCCAGGCAG CACTACAGGA TCAATTTTGT TCGGTCAACC AAACCGCAAA GCGGCTGGGA
GAGATCTTAG TCAGTTATGG TTGGGTCTCT GGCAAGGTGA TTGATTTTTT CTTGCGTTAT
CGCTCCCATC ACCTGATTCA GCCAGGTAAA CAGCTCGGCG ATTATCTGCT TGAGCTGGGT
TTGGTTTCGC ATGCTGATCT AGATAAGGCC CTTCGACTTC AAAAAACGAG TTATCTAGGT
CAGCCTCTCG GCCAAATTTT AGTCAAGTTT GGCTTAGTTA AAAAACAAAC AATTGATTAT
TTAGTTGATT CCATTATTAA GCCAGAGCTC GCACTGCTCA GTCAGTCGTG GACTGGCCCT
GAGGGAACTT CTAATCCCTA TAAATCGAAA CCTAATCCCC TAGCTGATGA GGAAGTTTAT
TTTGATGAAC TAACAACTTT CTCAGAAGCC TTTAGTCCTT TCAAAAAGCG TCAGTAA
 
Protein sequence
MSLGSQAFGQ AFPSDNFPEQ PQAAASPQPA RADKVDQQVV AVRRALGEHL VLGGFLTNLQ 
LQAALQDQFC SVNQTAKRLG EILVSYGWVS GKVIDFFLRY RSHHLIQPGK QLGDYLLELG
LVSHADLDKA LRLQKTSYLG QPLGQILVKF GLVKKQTIDY LVDSIIKPEL ALLSQSWTGP
EGTSNPYKSK PNPLADEEVY FDELTTFSEA FSPFKKRQ