Gene Synpcc7942_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2542 
Symbol 
ID3775135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2623378 
End bp2623725 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content55% 
IMG OID637800992 
Productputative cytochrome C6-2 
Protein accessionYP_401559 
Protein GI81301351 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0112262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTC TGTTGCGATC GCTCCTCATG GCTTTTTGCC TGCTGATTTG TGGGCTGACT 
ATCGCTCCAA TTTCCACTCA GGCTGCACCG GCAACTGGAG CAGCGCTCTT CGAGGCACAG
TGCGTTGGTT GCCATATTGG CGGCGGCAAT ATTATTCGCC GGGGCAAAAC CCTACAACTC
AAAGCCCTGA AAAAAAATGG TTACGACACT GCTGAAGCGA TCGCGACGAT CGTCAGCCAG
GGCAAAAACA ACATGTCCGC CTACAGCGAT CGCCTCAGCC CCGAGGAAAT TGCGATCGTT
TCCGCCTATG TGCTGGAACA AGCCAACGCG GGCTGGCCTC GGTCATAA
 
Protein sequence
MNRLLRSLLM AFCLLICGLT IAPISTQAAP ATGAALFEAQ CVGCHIGGGN IIRRGKTLQL 
KALKKNGYDT AEAIATIVSQ GKNNMSAYSD RLSPEEIAIV SAYVLEQANA GWPRS