Gene Synpcc7942_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2536 
Symbol 
ID3775129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2619093 
End bp2619626 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content59% 
IMG OID637800986 
Productheat shock protein DnaJ-like 
Protein accessionYP_401553 
Protein GI81301345 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.230081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG AGCGATCGCG ATGGCTGCAG TGTTTGGGAC TTCCTGCTAC GGCTGACGCG 
ATCGCGATCA AAACGGCTTA CCGTCAGTTG GCGCGGCAGT GGCACCCCGA TTGCAATCCC
GATCCGCAAG CCACCGCTCG TTTTCAGGAG ATCCAGATCG CCTACGAGCG GCTGTTAGTT
CTGCAAGAAT CCGCCACGGC TCAACCCGTT CCGCAAGCCC CCCCAGCGGA TGCAGCTCTG
ATTGCCCTCA AACGTCAGTT CCAGCCGCAA CTACAAGATC TGCTGGCGGA TGGACGCTGG
GCGAAGGCGA TCGCCTTAAC TGAAGCACTG CAACAACGCT TACCCGACGA TTGGGAAGTG
CGTCAGTGGT TGGCAATCTG TTATCTCCGG CAAGGGCAAG CCTTGCTGGT TCAACAACAG
CGACAGCAAG CGATCGCCTA CTTTGAGAAA GCGCGCCGCA CCGATCCGCA CAATCCACGC
CTCCAACAAG AAATTCAAGC CAGCCATAGG CTGGCCTCAG CTCGGCGAGC CTGA
 
Protein sequence
MSAERSRWLQ CLGLPATADA IAIKTAYRQL ARQWHPDCNP DPQATARFQE IQIAYERLLV 
LQESATAQPV PQAPPADAAL IALKRQFQPQ LQDLLADGRW AKAIALTEAL QQRLPDDWEV
RQWLAICYLR QGQALLVQQQ RQQAIAYFEK ARRTDPHNPR LQQEIQASHR LASARRA