| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2500 |
|---|
| Symbol | |
|---|
| ID | 3774520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2581096 |
|---|
| End bp | 2581716 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637800949 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_401517 |
|---|
| Protein GI | 81301309 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.138732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00247122 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCG TCTATTGGTT TTGCTTTTTA TTCGGTGGCA TTTTTGTGGC ACTTGCCGCT
GTCGGAGGGC TGGACCACGA TTTCGGTCAT GACTTCGACT CTGACTTTGA CCACAGTTTT
GACGCTGAAG CAGCGGTTGA GCCCGATGTA GCCGCTGATG TCGATCTGCC AGAGCCTCCA
AGTTCAGGGC GGCGGCTGTG GTTGCCGATT ACCAGCTTTA AGTTTTGGAC CTTTGGCCTT
TGTTTCTTTG GCATGACGGG TCTGCTGCTG GGCTGGCTCA ATCCGAACTT GCCGGGCTCT
CTGCAGTTGG GCCTTGCGAT CGCGATGGGT CTGCTGCTGG GTACGGGCAT GGCTGGTCTG
CTGCGGCAGT TGCGCAATCG CCAGGTCGAT AGTCTGGTGC GGAGTACGGA TCTGGTTGGT
GCCCGCGGCA TCGTTGTCTT GCCTTTCAAT GCCCAAAGCC GCGGCAAGGT GCAGCTGGAA
GTCAAAAACA GTGTGATTGA GCTCAGTGCT TGTACCGATT CGCCCTTGGA TTTTCAGCGG
GGCGATGAAG TGGTGGTGCT GCGATCGGAA GGGCAACGAC TGTGGGTGAT TGGTCGCACG
GAATTAGATC TGCAACCTTG A
|
|---|
| Protein sequence | MISVYWFCFL FGGIFVALAA VGGLDHDFGH DFDSDFDHSF DAEAAVEPDV AADVDLPEPP
SSGRRLWLPI TSFKFWTFGL CFFGMTGLLL GWLNPNLPGS LQLGLAIAMG LLLGTGMAGL
LRQLRNRQVD SLVRSTDLVG ARGIVVLPFN AQSRGKVQLE VKNSVIELSA CTDSPLDFQR
GDEVVVLRSE GQRLWVIGRT ELDLQP
|
|---|
| |