Gene Synpcc7942_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2498 
Symbol 
ID3774518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2578471 
End bp2579715 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content58% 
IMG OID637800947 
ProductBand 7 protein 
Protein accessionYP_401515 
Protein GI81301307 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.115439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00327007 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGAAA CGATTTTTGC GCTGCTGATT GTTCTAGGCG CTGGCGCCGG GGCTGGCAGC 
TTAGTCCTGC GCAATCTCTA CTACATCTGC CAACCCAGTG AAATTTTGAT CTTTGCTGGC
AGTAGTCGCC GCAGTAGTGA TGGCCGCCGA GTTGGCTATC GCTTGGTCAA GGGCGGCAGC
AGCCTGCGGG TACCTCTGCT GGAAAAAGCG CTCCGCATGG ATCTGACCAA CATGATCATT
GAGTTGCGCG TTTCCAATGC CTTCTCCAAG GGCGGCATTC CCCTGACTGT TGAAGGCGTT
GCCAATATCA AGATTGCTGG GGAAGAACCG ACCATCCACA ACGCGATCGA GCGGCTGCTT
GGCAAAAACC GTAAGGAAAT CGAGCAAATT GCCAAGGAGA CCCTCGAAGG CAACTTGCGT
GGTGTTTTAG CCAGCCTCAC GCCGGAGCAG ATCAACGAGG ACAAAATTGC CTTTGCCAAA
AGTCTGCTGG AAGAGGCGGA GGATGACCTT GAGCAGCTGG GTCTAGTCCT CGATACGCTG
CAAGTCCAGA ACATTTCCGA TGAGGTCGGT TATCTCTCGG CTAGTGGACG CAAGCAGCGG
GCTGATCTGC AGCGAGATGC CCGAATTGCT GAAGCCGATG CCCAGGCTGC CTCTGCGATC
CAAACGGCCG AAAATGACAA GATCACGGCC CTGCGTCGGA TCGATCGCGA TGTAGCGATC
GCCCAAGCCG AGGCCGAGCG CCGGATTCAG GATGCGTTGA CGCGGCGCGA AGCGGTGGTG
GCCGAAGCTG AAGCGGACAT TGCTACCGAA GTCGCTCGTA GCCAAGCAGA ACTCCCTGTG
CAGCAGGAGC GGATCAAACA GGTGCAGCAG CAACTTCAAG CCGATGTGAT CGCCCCAGCT
GAGGCAGCTT GTAAACGGGC GATCGCGGAA GCGCGGGGGG CCGCCGCCCG TATCGTCGAA
GATGGAAAAG CTCAAGCGGA AGGGACCCAA CGGCTGGCGG AGGCTTGGCA GACCGCTGGT
GCTAATGCCC GCGACATCTT CCTGCTCCAG AAGCTCGAGT CCCTGCTCGT CACGCTTTCA
GGCACCGTGC CAGATATCGA CGTGGAGTCG ATCACTGTGA TTGGCGAAGG GGAAGGCAGC
GCTACCCAAA TCGCTAGCTT GCTGGAGAAG CTGAAACAAA CCACGGGCAT TGATCTGGCG
AAATCCCTAC CGGGTCAATC CGACTCGCCC GCTGCGAAGT CCTAA
 
Protein sequence
MFETIFALLI VLGAGAGAGS LVLRNLYYIC QPSEILIFAG SSRRSSDGRR VGYRLVKGGS 
SLRVPLLEKA LRMDLTNMII ELRVSNAFSK GGIPLTVEGV ANIKIAGEEP TIHNAIERLL
GKNRKEIEQI AKETLEGNLR GVLASLTPEQ INEDKIAFAK SLLEEAEDDL EQLGLVLDTL
QVQNISDEVG YLSASGRKQR ADLQRDARIA EADAQAASAI QTAENDKITA LRRIDRDVAI
AQAEAERRIQ DALTRREAVV AEAEADIATE VARSQAELPV QQERIKQVQQ QLQADVIAPA
EAACKRAIAE ARGAAARIVE DGKAQAEGTQ RLAEAWQTAG ANARDIFLLQ KLESLLVTLS
GTVPDIDVES ITVIGEGEGS ATQIASLLEK LKQTTGIDLA KSLPGQSDSP AAKS