Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2493 |
Symbol | |
ID | 3774513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2574061 |
End bp | 2574822 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800942 |
Product | ATPase |
Protein accession | YP_401510 |
Protein GI | 81301302 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.509361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00272888 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTCC TGCAGCTCGA GCAAGTGACG CGCCGCTTTG GTGGCCTTGT TGCGGTCAAT CAAGTCTCCT TCAAGGTCGA AGTGGGTGAG ATCTTTGGAC TGATTGGCCC CAATGGTGCG GGCAAGACAA CGCTCTTCAA CTTGATCACC GGCTTACAAC CGTTAAGCGG CGGTGAGATT TGCTTTCAGG GCGATCGTCT CGATCGCCAG CGACCGGATC AGATCGCGCA GCGGGGCATT GCCCGAACAT TTCAGAACCT GAGGCTGTTC AATCAGCTAT CAGTGTTCGA GAACGTGCTG GTGGCGCGTC ATCGGCAAGC TCGTACTTCT CTGTGGGATG AGCTGATCGG GTCGAGCCGA GCGACCCGTC AAAGTCGAGG CGATCGCCGC CGTGTGCAGG AATTGCTGGA GTTGCTCGAG CTGAGCGATC AAGCGGATCA GCCCGCTGCC AGTTTGGCCT ATGGCGATCG CCGCCGTTTG GAAATTGCCC GTGCGCTAGC GCTAGAGCCG CAACTCTTGC TGTTGGATGA GCCTGCAGCT GGACTCAACC CTCGGGAAAA ACAGGATTTA AGCGATCGCA TTCGGGCGAT TCGGGAGCAA TTCCAGCTGA CGGTGGTTTT GATTGAGCAC CATGTGCCGC TGGTGATGGG TCTGTGCGAT CGCATTGCGG TATTGGATTT TGGGCAATTG ATTGCCCTTG GCGATCCGGC CACGGTTCGC CAGGATCCGG CTGTGATTGA GGCATACCTA GGCGATGAGT GA
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Protein sequence | MSLLQLEQVT RRFGGLVAVN QVSFKVEVGE IFGLIGPNGA GKTTLFNLIT GLQPLSGGEI CFQGDRLDRQ RPDQIAQRGI ARTFQNLRLF NQLSVFENVL VARHRQARTS LWDELIGSSR ATRQSRGDRR RVQELLELLE LSDQADQPAA SLAYGDRRRL EIARALALEP QLLLLDEPAA GLNPREKQDL SDRIRAIREQ FQLTVVLIEH HVPLVMGLCD RIAVLDFGQL IALGDPATVR QDPAVIEAYL GDE
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