Gene Synpcc7942_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2493 
Symbol 
ID3774513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2574061 
End bp2574822 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content57% 
IMG OID637800942 
ProductATPase 
Protein accessionYP_401510 
Protein GI81301302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.509361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00272888 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTCC TGCAGCTCGA GCAAGTGACG CGCCGCTTTG GTGGCCTTGT TGCGGTCAAT 
CAAGTCTCCT TCAAGGTCGA AGTGGGTGAG ATCTTTGGAC TGATTGGCCC CAATGGTGCG
GGCAAGACAA CGCTCTTCAA CTTGATCACC GGCTTACAAC CGTTAAGCGG CGGTGAGATT
TGCTTTCAGG GCGATCGTCT CGATCGCCAG CGACCGGATC AGATCGCGCA GCGGGGCATT
GCCCGAACAT TTCAGAACCT GAGGCTGTTC AATCAGCTAT CAGTGTTCGA GAACGTGCTG
GTGGCGCGTC ATCGGCAAGC TCGTACTTCT CTGTGGGATG AGCTGATCGG GTCGAGCCGA
GCGACCCGTC AAAGTCGAGG CGATCGCCGC CGTGTGCAGG AATTGCTGGA GTTGCTCGAG
CTGAGCGATC AAGCGGATCA GCCCGCTGCC AGTTTGGCCT ATGGCGATCG CCGCCGTTTG
GAAATTGCCC GTGCGCTAGC GCTAGAGCCG CAACTCTTGC TGTTGGATGA GCCTGCAGCT
GGACTCAACC CTCGGGAAAA ACAGGATTTA AGCGATCGCA TTCGGGCGAT TCGGGAGCAA
TTCCAGCTGA CGGTGGTTTT GATTGAGCAC CATGTGCCGC TGGTGATGGG TCTGTGCGAT
CGCATTGCGG TATTGGATTT TGGGCAATTG ATTGCCCTTG GCGATCCGGC CACGGTTCGC
CAGGATCCGG CTGTGATTGA GGCATACCTA GGCGATGAGT GA
 
Protein sequence
MSLLQLEQVT RRFGGLVAVN QVSFKVEVGE IFGLIGPNGA GKTTLFNLIT GLQPLSGGEI 
CFQGDRLDRQ RPDQIAQRGI ARTFQNLRLF NQLSVFENVL VARHRQARTS LWDELIGSSR
ATRQSRGDRR RVQELLELLE LSDQADQPAA SLAYGDRRRL EIARALALEP QLLLLDEPAA
GLNPREKQDL SDRIRAIREQ FQLTVVLIEH HVPLVMGLCD RIAVLDFGQL IALGDPATVR
QDPAVIEAYL GDE