| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2485 |
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| Symbol | |
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| ID | 3774505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2566135 |
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| End bp | 2566728 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637800934 |
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| Product | hypothetical protein |
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| Protein accession | YP_401502 |
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| Protein GI | 81301294 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.40612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00101657 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAGAA TTCATAAACG ATCGCGCCGG TCGCAGTTAG GCTTCTCACT GGTCGAGATC
CTAGTCGCTG CTATTCTGAC TGTCCTCTTA GCTCAAGCAA CTGCGGCTGC TTTAAGAATT
TCAGTCCAAA CTCAAAATCG GGCCAGCACT GAAAACTCTT TTGAAAATGC CATTGTTGCT
GATTTAGAGC AAGTTAGAGC TATCAATCGA AATCTTTGCC GTAATCCTAA CTTTGATCGC
ACTGCAACAA CTTCTCCTAA CAACCTGAGC TATGGTCCTT TTGGTGACTG TGCTGGAACT
ATCTTTCAGG AAAGATGCCG GGCAACGGGC ACCACACCCG GATTTGGTAA TCTTCTCCAA
GCGCAAGTCC CTAATTTTAC GAGCCAGACT GTGATTGTGA ATGGACAGAC TTGGACTATA
TCTCGACAAA CTCTTGTTCC CGATCGTCCT CTCAACTCAG GAGATGCCGG CTATGCAGAA
TCGAGTCAGT CAGTATTGAA GGTTAGATAT GACTTGACTA GAGGAAGTAC AACAATTGCA
CCGGCTTTTG TCACCGAGTT TGTTCCTGAT GCAGTAGGCT CGTGTCAAGG ATAA
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| Protein sequence | MKRIHKRSRR SQLGFSLVEI LVAAILTVLL AQATAAALRI SVQTQNRAST ENSFENAIVA
DLEQVRAINR NLCRNPNFDR TATTSPNNLS YGPFGDCAGT IFQERCRATG TTPGFGNLLQ
AQVPNFTSQT VIVNGQTWTI SRQTLVPDRP LNSGDAGYAE SSQSVLKVRY DLTRGSTTIA
PAFVTEFVPD AVGSCQG
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