Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2484 |
Symbol | |
ID | 3774504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2565297 |
End bp | 2565989 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637800933 |
Product | hypothetical protein |
Protein accession | YP_401501 |
Protein GI | 81301293 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.371639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00111063 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTACGC AACGCCTCTT TTGGCGATGG TTTTTACAGC GTCATGGTGA AGCTGGTATC ACTCTAGTCG AGGTTCTAGT TGCGGGTATT ATTGGCGTGT TGGTTGTTTT GGCAGGCGGT TATGCGTTAG TGACCAACCT CCGAGTCGAT CGCGAACTGT CATCAGCCGC AATTCAACGC AATCTTCAAA CGAGAGCTTT GGAGTACATC AGTAGTGAAG TCCGTCAAGC CAACTTAATC TACGCGCCGA ATAACACACC GAACCTGTGC AGTAGCTATA CGAGAGTCTT GGGGCTGCAA ACAACGGTGA ATGGTAGCAA TCGCAATATT GTTTATGCGG TTGGCAATGC CAACAACCCA TGGCGGGGCG ATCGCGTGCT ATATCGCTGT GGCCCGCCAA TCGATACCTC CACTGGACGT TACAGCTCAG GTAGCGACGT TGAAGAAGTG ATTTTGGATG GCTTGAGCAG CGCTACCCTG GTGGCTAATA GCAATGGATG TGGTGCTGTC CCGACGGCCT ACGCTGTTAG CAGCAGCAAT ACAGCAGGCC TGCGTGCTTT TTTCCGTACT GCCAGTAACG TCGTGAACAC TAATTCCGCA CAAATTCTGC TGGGGATGCA AATTGATCGA GGTATTCAAG GAAATGCAAC GAGTTGTGCA AGCATTGTTG CTTCCAATCG TTCGACCCCT TGA
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Protein sequence | MSTQRLFWRW FLQRHGEAGI TLVEVLVAGI IGVLVVLAGG YALVTNLRVD RELSSAAIQR NLQTRALEYI SSEVRQANLI YAPNNTPNLC SSYTRVLGLQ TTVNGSNRNI VYAVGNANNP WRGDRVLYRC GPPIDTSTGR YSSGSDVEEV ILDGLSSATL VANSNGCGAV PTAYAVSSSN TAGLRAFFRT ASNVVNTNSA QILLGMQIDR GIQGNATSCA SIVASNRSTP
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