Gene Synpcc7942_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2484 
Symbol 
ID3774504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2565297 
End bp2565989 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content51% 
IMG OID637800933 
Producthypothetical protein 
Protein accessionYP_401501 
Protein GI81301293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.371639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00111063 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTACGC AACGCCTCTT TTGGCGATGG TTTTTACAGC GTCATGGTGA AGCTGGTATC 
ACTCTAGTCG AGGTTCTAGT TGCGGGTATT ATTGGCGTGT TGGTTGTTTT GGCAGGCGGT
TATGCGTTAG TGACCAACCT CCGAGTCGAT CGCGAACTGT CATCAGCCGC AATTCAACGC
AATCTTCAAA CGAGAGCTTT GGAGTACATC AGTAGTGAAG TCCGTCAAGC CAACTTAATC
TACGCGCCGA ATAACACACC GAACCTGTGC AGTAGCTATA CGAGAGTCTT GGGGCTGCAA
ACAACGGTGA ATGGTAGCAA TCGCAATATT GTTTATGCGG TTGGCAATGC CAACAACCCA
TGGCGGGGCG ATCGCGTGCT ATATCGCTGT GGCCCGCCAA TCGATACCTC CACTGGACGT
TACAGCTCAG GTAGCGACGT TGAAGAAGTG ATTTTGGATG GCTTGAGCAG CGCTACCCTG
GTGGCTAATA GCAATGGATG TGGTGCTGTC CCGACGGCCT ACGCTGTTAG CAGCAGCAAT
ACAGCAGGCC TGCGTGCTTT TTTCCGTACT GCCAGTAACG TCGTGAACAC TAATTCCGCA
CAAATTCTGC TGGGGATGCA AATTGATCGA GGTATTCAAG GAAATGCAAC GAGTTGTGCA
AGCATTGTTG CTTCCAATCG TTCGACCCCT TGA
 
Protein sequence
MSTQRLFWRW FLQRHGEAGI TLVEVLVAGI IGVLVVLAGG YALVTNLRVD RELSSAAIQR 
NLQTRALEYI SSEVRQANLI YAPNNTPNLC SSYTRVLGLQ TTVNGSNRNI VYAVGNANNP
WRGDRVLYRC GPPIDTSTGR YSSGSDVEEV ILDGLSSATL VANSNGCGAV PTAYAVSSSN
TAGLRAFFRT ASNVVNTNSA QILLGMQIDR GIQGNATSCA SIVASNRSTP