| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2481 |
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| Symbol | |
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| ID | 3774501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2561836 |
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| End bp | 2563068 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637800930 |
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| Product | hypothetical protein |
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| Protein accession | YP_401498 |
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| Protein GI | 81301290 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.106087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000612732 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAGCG ATAACTTAAG TGCCTTGCTA AGAATCTATT GGGCTCTAGT ACCCAAGGAT
GAAGCGCGAT CGCAGCAAGG GTTTACGATT ACCGAGTTAT TGGTCGCCAG TACCATTGGT
ATCATTGTGA TTTTGGGCGG AGGCTATCTG CTTAAGACTA ATCTCGATGT CGATCGTGTT
AGCTCTACCA ACTCAGCTCA AAGGAATATT CAAAATCGAG CCTTAGATTT TATTAGTAAT
GAAATTAGGC GGGCCAATGC TGTTGTGAGT TCAAGCTCTC GTTCCTGTAA CGGAGTAACG
CCAGTCCTCA GTATTCGAGT ACCTGATCCG AGCAACTCTA CGAGCACTTC CGCAGTCAGA
ATTATCGACT ACGCCGTTGC TACTCCAGCT GCTCCTTGGC AAACGACTAG TAATGCTCGG
GCGATTTATC GATGTGGCCC AGAGATTAAC AGTTCTGGTC AATATGATTT CACTTCTTCC
ACAACCGTGA CTGACCTGCT CGTTGATCGA GTTGCAAATG CTAACCCTAC GGCAAGCGGT
GTTTGTAGCA ATCTTAATGC CAATGCAATT ACTTCACCTT TTTCGGGCTC AGCAACAACT
AGTGGAACAA ACGGTTTAGT TGTTCGCTAC GAAGCAAGTG ATCCGCGATC GGCTCAAGTC
TTGATTGCCT TCTTGCGAAA CGTAGGGAAT GGAGGTTCTC CAGGTACCGA CTGCGTCACG
AATATTGTTG CTGCTCGCGC GATTGATCCT GCCAATATTG CGTCTAGCCC ATCGCCTAGC
CCTACGCCGA CACCCACGCC TACGCCGAGC CCATCTCCTA CTCCGTCACC TAGCCCTACG
CCGACACCCA CGCCTACGCC GAGCCCATCT CCCACTCCGT CACCTAGCCC TACGCCGACA
CCCACGCCCA CGCCAAGCCC ATCACCTGCG CCGACTCCCG TTTCTATCTC AATTGCCTCA
ATTTCTGGTG GAGGTAATAA CTCAACTGTT GGGCTTAACC TTGGTAGCCT TAGTTTGCTC
GCAGGTGTAA CCGGTTTCAG GATTTTTGGT TGCACACAAA ACAATAGTAC CTGTACACCT
TCCACGGGCG GTACGCCGAC CTTAACTACT TCATCCACTA CCCCTACTAT TCCAAATATC
GACTTGCAAG GTAATAGGAG AGCTTGTTTT ACTGCTCAAG CAGTTGGACC TCTCAATATT
GTTTTAGGAA CTTCTACTGT GTGCACAAAT TAA
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| Protein sequence | MKSDNLSALL RIYWALVPKD EARSQQGFTI TELLVASTIG IIVILGGGYL LKTNLDVDRV
SSTNSAQRNI QNRALDFISN EIRRANAVVS SSSRSCNGVT PVLSIRVPDP SNSTSTSAVR
IIDYAVATPA APWQTTSNAR AIYRCGPEIN SSGQYDFTSS TTVTDLLVDR VANANPTASG
VCSNLNANAI TSPFSGSATT SGTNGLVVRY EASDPRSAQV LIAFLRNVGN GGSPGTDCVT
NIVAARAIDP ANIASSPSPS PTPTPTPTPS PSPTPSPSPT PTPTPTPSPS PTPSPSPTPT
PTPTPSPSPA PTPVSISIAS ISGGGNNSTV GLNLGSLSLL AGVTGFRIFG CTQNNSTCTP
STGGTPTLTT SSTTPTIPNI DLQGNRRACF TAQAVGPLNI VLGTSTVCTN
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