Gene Synpcc7942_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2391 
Symbol 
ID3774675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2465228 
End bp2465848 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content52% 
IMG OID637800839 
Productoxidoreductase-like 
Protein accessionYP_401408 
Protein GI81301200 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.569722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00384612 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCATTGG TCTTGCTGTT GCAGAACATT TTATTAACCA GTGCGATCGC CTTGTGGCGG 
TGTCGCGGAC AGCGGCTCCA GTTGGGGGAA TGGATTCAAG CGGATTTATC GGAGTTGGCC
GGAGTTGAAA CGGTAGCTCG AGCGATCGGG GAGGATTGCC TCGATGCACT GCTGTACATG
GGCGGAACTT GGGAAACCCA TGCTTTTACA CCGCAATATG ACTTTGAAAG CTGTTCGGAT
GAGGATATTG CGCGGGTAAT TGCGGTCAAT CTTGTTGCGC CGATTCGCTT GGTGAAAGTC
TTACTGCCTG CACTGCGGCG ATCGCATAAT CCCAAAATCG TTTTTATGGG CGCTCTCTCG
GGTCGAGATA ATTTTCCTGC AAGAGAGGTT GCTAACAGTG CGTCGAAGTT TGGGCTGCGG
GGAGTTGTTC ACGCCTTACG GGAAGAATTG CGATCGCAGC AGATTGGGGT CACGGTGATT
AATCCGGGAA ATGTGGGTAC CCCAGAAGTG TTAGCGGATC TCGCAGCAGC TAATCTGACA
GGTGGTGAGG CGATTCCCCT GAGTGATCTT CTAGCGATTC TTGACTGTGT TCTTTCTTTA
GCGCGAGCAA CCCGTATCTA A
 
Protein sequence
MALVLLLQNI LLTSAIALWR CRGQRLQLGE WIQADLSELA GVETVARAIG EDCLDALLYM 
GGTWETHAFT PQYDFESCSD EDIARVIAVN LVAPIRLVKV LLPALRRSHN PKIVFMGALS
GRDNFPAREV ANSASKFGLR GVVHALREEL RSQQIGVTVI NPGNVGTPEV LADLAAANLT
GGEAIPLSDL LAILDCVLSL ARATRI