Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2391 |
Symbol | |
ID | 3774675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2465228 |
End bp | 2465848 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637800839 |
Product | oxidoreductase-like |
Protein accession | YP_401408 |
Protein GI | 81301200 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.569722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00384612 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCATTGG TCTTGCTGTT GCAGAACATT TTATTAACCA GTGCGATCGC CTTGTGGCGG TGTCGCGGAC AGCGGCTCCA GTTGGGGGAA TGGATTCAAG CGGATTTATC GGAGTTGGCC GGAGTTGAAA CGGTAGCTCG AGCGATCGGG GAGGATTGCC TCGATGCACT GCTGTACATG GGCGGAACTT GGGAAACCCA TGCTTTTACA CCGCAATATG ACTTTGAAAG CTGTTCGGAT GAGGATATTG CGCGGGTAAT TGCGGTCAAT CTTGTTGCGC CGATTCGCTT GGTGAAAGTC TTACTGCCTG CACTGCGGCG ATCGCATAAT CCCAAAATCG TTTTTATGGG CGCTCTCTCG GGTCGAGATA ATTTTCCTGC AAGAGAGGTT GCTAACAGTG CGTCGAAGTT TGGGCTGCGG GGAGTTGTTC ACGCCTTACG GGAAGAATTG CGATCGCAGC AGATTGGGGT CACGGTGATT AATCCGGGAA ATGTGGGTAC CCCAGAAGTG TTAGCGGATC TCGCAGCAGC TAATCTGACA GGTGGTGAGG CGATTCCCCT GAGTGATCTT CTAGCGATTC TTGACTGTGT TCTTTCTTTA GCGCGAGCAA CCCGTATCTA A
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Protein sequence | MALVLLLQNI LLTSAIALWR CRGQRLQLGE WIQADLSELA GVETVARAIG EDCLDALLYM GGTWETHAFT PQYDFESCSD EDIARVIAVN LVAPIRLVKV LLPALRRSHN PKIVFMGALS GRDNFPAREV ANSASKFGLR GVVHALREEL RSQQIGVTVI NPGNVGTPEV LADLAAANLT GGEAIPLSDL LAILDCVLSL ARATRI
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