Gene Synpcc7942_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2358 
Symbol 
ID3774641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2424522 
End bp2425352 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content55% 
IMG OID637800806 
Productnitrilase-like 
Protein accessionYP_401375 
Protein GI81301167 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.407406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTT ACTTGGCCGC AGCTGTGCAG ATGACCAGTC TGCCGGATCT CGAAAAGAAT 
CTCACTCAAG CGGAAGAATG GATCGACCTA GCCGTGCGGC GGGGTGCTGA GCTTGTTGGT
CTGCCAGAGA ACTTTTCATT TTTAGGGGAA GAGGCCCAAA AGGTTCAGCA AGCCCCTGAG
ATTGCTGAAC GCACCGAAAA GTTCCTGAAA ACGATGGCCC AGCGCTATCA AATTACGTTG
TTGGGCGGGG GCTTCCCGGT TCCAGCCGAG CACAATCACG TCACCAACAC ACTACTTCTC
GTTGGGCCTG ATGGTCAGAC CCTAGCCCAG TACAACAAGG TTCACCTGTT CGATGTCGAC
CTCCCGGATG GCAACACCTA TCAGGAGTCG GCAACGGTTC TCGCTGGTCG TGAGTATCCG
CCCGTCTATG ACTCGGAACG TTTTGGGCGC TTGGGATTTT CGATTTGCTA TGACGTCCGC
TTCCCGGAAC TTTATCGCCA TCTAGCCAAT CAGTCGGCAG AAGTGATTTT TGTGCCAGCG
GCATTCACTG CCTTTACCGG CAAAGATCAC TGGCAGGTAC TGCTGCAGGC CCGAGCGATT
GAGAATACGG CATATATCAT TGCGCCGGCA CAAACGGGTG TTCATTACGG ACGCCGTCAA
ACCCATGGCC ACGCCATGAT TGTCGATCCG TGGGGGATTG TTTTGGCCAA TGCAGGGCGC
GAGCCTGGCC TCGCGATCGC TGAAATCTCG CCTCGGCGGC TGGCTACCGT GCGCCAGCAG
ATGCCCTGTC TCCAACACCG CGTCCTTTCA ACTACAGTCC CGAGTGCATA A
 
Protein sequence
MKSYLAAAVQ MTSLPDLEKN LTQAEEWIDL AVRRGAELVG LPENFSFLGE EAQKVQQAPE 
IAERTEKFLK TMAQRYQITL LGGGFPVPAE HNHVTNTLLL VGPDGQTLAQ YNKVHLFDVD
LPDGNTYQES ATVLAGREYP PVYDSERFGR LGFSICYDVR FPELYRHLAN QSAEVIFVPA
AFTAFTGKDH WQVLLQARAI ENTAYIIAPA QTGVHYGRRQ THGHAMIVDP WGIVLANAGR
EPGLAIAEIS PRRLATVRQQ MPCLQHRVLS TTVPSA