| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2282 |
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| Symbol | |
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| ID | 3774564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2351102 |
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| End bp | 2353015 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800729 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_401299 |
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| Protein GI | 81301091 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase
[COG4250] Predicted sensor protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.725476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT CCACTCTTGC TCAGTTGCTC GAAATTTTGC GGCAGCAATC TTTTGTGGAT
TTGCCGCGTC CGCAAATCTA CTTCAAGGCT TCGCTGACAG CCCTGTCGCA TGCCCTGGAG
GATTTGGTCT TTGCCACGGA TGAGAAGCCA TTATTAATCG CCAGTTTCCA GCGCGAGCGC
TTCTATCGCC AAGAAGCCCA TCGCTACGAG CGGCTGGCCC ACGTGACCAG TGCTCAGTTT
GTGCTGGCCG CCGCAGAATC CCGCTTTGCC GATGCGGATA CCTATCCCGC CGTGGCGTTT
CCACCCTCCG ATCCGCTGGC CTTGGAATGG AATCTGGTGG TGATTGGCCC TCGCACCACC
GGCTGCCTGA TCTGCATGGA AAAACTCGAT CGCCAAGGTC CCTTAGAGCC GGCCATGGAT
ACGGCACGCC GCTTTGAGGG CATTTGGACC ACCGATCGCC GCGTCGTCAC GGTTGCAGCC
GAGCTTCTGC TCGATCGCAT TGCTGAATTG CGACCCGATT TACAAGCCAA GACAGAGTCG
GCGATCGCGG CGCTTCCTCC TGCCGAAGCC AGTGCTCCCA GCGTCGAAAC GCCTTTTGCT
GAGCGCCTGC TCAACTATCT ACAAGCCGGA CAATACAAAC TCCTCAAGGC CTATCGCGCC
CAGGCCCGAC AAACTCGCAA AGAACAACTG ATCAACACGA TCAGTAGTGC GGTGCGCCAA
TCGCTCAATC CTGAAGCGGT TCTCGAAATT GCCGCACGAG AACTTGGGCT GTCGCTGGCT
GCCAATCGCT GTCTGATCTA TGCCTGCACG CCGGAAACGG AACAGATTCT GGTGGAGCAT
GAGTATCGCC AAACCGAGAC CGCTTCCCTA GGCGATCGCC TCTGGCCCCT GCAAGAGAAT
CCACTCTTCC AGCAAGTCGC CACTGATCGC AAAGCGATTC GTCTGACCGT CGATGATCCT
GAAGCGACCC TGCCTTACAT CCAAGCGATG CGACAGCAGT GGGACATCGC CCACTGGCTG
CTAATTCCGG TGCAGTATCG CCAAGAACTG ATCGGGATGA TTGAACTCCA TCGCGAAGCG
ACTGCCGAGC CTTGGGATCT CGCGGATCAA GAACTGGCAG AAGCGATCGC GACTCAGATT
GGGGTGGCAC TGATTCAAGC CCAGACCTTC CGGCAGCTGG AAAATCTGGA ACGCACCCGC
AGCAATCTGA CGGCGATTAT TGGTCACGAG CTGCGAACCC CCCTCTCGAC TGTGCAAGTC
TGCCTCGAAA GTTTGGCCAC TGAGCCGGAT ATGAGTGCGG ATCTGCGCCA AGTGATGTTG
CAGACGGCTT TGGATGATGC GGAGCGGCTG CGCTTGTTGG TGCAAGATTT TCTGACCCTC
TCGCGTTTGG AAAGTGGCCG GATTGACTGG CATCCAGAAT CGCTGGCGCT GGATGAATGC
GTCGCCATGG CGATGAGTGG ACTGCGATCG CGGCATCAGC GCGACTCACT GCCCAGCATC
GAACAAAAGC TGCCCGCCAG CTTGCCGCTG GTGCGGGTGG ATGGCGACTG GCTGGTGGAA
GTGCTGATTA AGCTGCTGGA CAACGCCTGT AAGTTCACCA GCGCCCAAGG CCACGTTTCG
ATTACGGCGG TCGTAGAAGG CGATCGTGCC TTGCGTGTGG CGATTACCGA CGATGGCCGA
GGAATCGAAC CCGATCGCCT CGAAGCAGTT TTCGATCGCT TCTACCAAGA AGATGGCGCG
CTACGGCGCA GCCAGGGCGG CAGTGGCCTG GGGCTCGCGA TTTGTCGCCA GATTGTCGAG
CGACTGGGTG GGCATATCTG GGCTGAGTCA GAAGGGCGCG ATCGCGGGAG TTGTTTTCAG
TTCACGCTTC CTCTGGCGAC CCGGCATCCG CAGACGGCAA ACGCACTGAC TTAA
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| Protein sequence | MADSTLAQLL EILRQQSFVD LPRPQIYFKA SLTALSHALE DLVFATDEKP LLIASFQRER
FYRQEAHRYE RLAHVTSAQF VLAAAESRFA DADTYPAVAF PPSDPLALEW NLVVIGPRTT
GCLICMEKLD RQGPLEPAMD TARRFEGIWT TDRRVVTVAA ELLLDRIAEL RPDLQAKTES
AIAALPPAEA SAPSVETPFA ERLLNYLQAG QYKLLKAYRA QARQTRKEQL INTISSAVRQ
SLNPEAVLEI AARELGLSLA ANRCLIYACT PETEQILVEH EYRQTETASL GDRLWPLQEN
PLFQQVATDR KAIRLTVDDP EATLPYIQAM RQQWDIAHWL LIPVQYRQEL IGMIELHREA
TAEPWDLADQ ELAEAIATQI GVALIQAQTF RQLENLERTR SNLTAIIGHE LRTPLSTVQV
CLESLATEPD MSADLRQVML QTALDDAERL RLLVQDFLTL SRLESGRIDW HPESLALDEC
VAMAMSGLRS RHQRDSLPSI EQKLPASLPL VRVDGDWLVE VLIKLLDNAC KFTSAQGHVS
ITAVVEGDRA LRVAITDDGR GIEPDRLEAV FDRFYQEDGA LRRSQGGSGL GLAICRQIVE
RLGGHIWAES EGRDRGSCFQ FTLPLATRHP QTANALT
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