| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2280 |
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| Symbol | |
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| ID | 3774562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2349235 |
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| End bp | 2350167 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637800727 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_401297 |
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| Protein GI | 81301089 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCTC AAGTCACTGC TGGGTCGTCA GGGCCCGTTT GCTTCCTGAC GGTCGGTTTG
CGATTGCCAT CTGCTAGGGG ACAGCCTGTG GTTTCCAACT TCAATCAGCC CCGCCCACCG
CAGCGCCAGC GGTGGGTCGA TTCCCTGCTC GGCGTTTCCT TGGTGGCATT GGTGGTGGCT
GCAGCCTTGC CCCTGCTATT GCCCCTGGTG CGATTGCCTG GGGGAAGTTC GGCCCGCGAT
CGCGAGTTGG CGGCAGCCCA AGCCACGGCC TTCCAGACAG TGTTGCAACG GGATCCTGAC
AATCTATCGG CCCTGCGATC GCTGATTGGG GTCTACCTGC AACAGCAACA GTTACAAGCT
GCGATCGCGC CCTTGCAGCG TTTGGCTCGA CTGCAACCCC AGCAGCCTGC CTATCGAGTC
CTGCTGGCCC AAACCCAGGC ACAGCTGGGC GATCGCGAAG CTGCCGCCCA AACCTATCGC
CAGATTTTGG AAACGGCACC CACAAACTTG GAAGCCCTGC GCGGTTTCAC GCAGCTGCTC
CTGACCCAAA AGCAGCCGAC AGCAGCAGTC GATCTGTTGC AGAAAGCCCG CCAGACCGAC
AAAATCACCC CTGCTGACCA AGTAAGCATA GACCTCATGC TGGCTCAGGT CTATGCCAAT
CAGGGTCAGA TTGATGATGC GATTGCCCTC TACGATCGCA GTGCCCAGAA CAACGGTCGT
GACTTCCGTC CCTTGCTGGC GAAAGCACTC TTACTCAAAC AGCAGGGCGA TCTGCAGAAA
GCAACGCCAA TTTTTCAAGA GGCGATCGCG ATCGCGCCTG CGCAGTATCG AGATCAAATT
CGTCAGCTCA GCCCCGCGAG TATGCCTGCC ACTCCCCCTA CTCAGCCTGC GACGAAGACC
CCACCAACGG CACCCCCGCC ACCACCGAAT TGA
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| Protein sequence | MASQVTAGSS GPVCFLTVGL RLPSARGQPV VSNFNQPRPP QRQRWVDSLL GVSLVALVVA
AALPLLLPLV RLPGGSSARD RELAAAQATA FQTVLQRDPD NLSALRSLIG VYLQQQQLQA
AIAPLQRLAR LQPQQPAYRV LLAQTQAQLG DREAAAQTYR QILETAPTNL EALRGFTQLL
LTQKQPTAAV DLLQKARQTD KITPADQVSI DLMLAQVYAN QGQIDDAIAL YDRSAQNNGR
DFRPLLAKAL LLKQQGDLQK ATPIFQEAIA IAPAQYRDQI RQLSPASMPA TPPTQPATKT
PPTAPPPPPN
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