| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2266 |
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| Symbol | |
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| ID | 3774548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2334654 |
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| End bp | 2335718 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637800713 |
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| Product | periplasmic polyamine-binding protein of ABC transporter |
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| Protein accession | YP_401283 |
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| Protein GI | 81301075 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.242128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.482292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTGA GTCGTCGCCG TTTTTTGCAA GCCAGTGTGG GTCTGCCGGG CCTAGCACTG
GCAGGCTGCC GCTCGGCCGA TCTACAACTG CTGCTGCCGG GTAACACTGT CCCTGCACCC
ATCCTGCGCC GCTTTCAAGA TCGCACTCAG ATTACGGTGC AGCTTGATCG CGCGGCGGGC
CTGGTCGATA GCAGTCGTCT ATTGCTGACA GAAGACCCTA GCCGCCTGCC CAATCTCTTG
GGGATTGGAG ATGCTTGGCT CCAGTCTGCG ATCGCCTCAG GGCGACTGGC CCCCTTTAAC
CCCAATCACT GGCGGCATTG GACCTCGTTG CCTCAACGTT GGCGACAGCA ACTGCGGCGC
GATCGCCAAG GGGTGCCTAG CGAAGCAGGA GAGATTTGGG CGGCGCCCTA CCGCTGGGGC
ACCACGATGA TTGCCTTTCG CCGCGATCGC TTGACGAGCC CACTCCAAGA CTGGACAGAT
CTGTGGCGGC CCGAACTGCG TGGCCAGCTG ATCTTGCCAG ATGATCCTCG CGAAGTAATT
GGTCTGACGC TCAAACGGTT GGGCTGGAGC TATAACCAAG CTAATTTGGC GGAGATTCCC
CAACTCGAAC CTTTGCTGGC AGCCTTACAG CAACAGGTCA AGCTCTACAG CTCCCGCAAC
TATTTGCAGC CGTTGTTACT CGGTGATGCT CTGGCTGCAG TGGGTTGGTC GGCCGATATT
TTGGCTGCCC TCCGCCGAGA TTCTCGCTTG GCTGCTGTTG TCCCGCGATC GGGCACTGCC
ATTTGGCTGG ATCTGTGGGT GCAACCCCAA GGGCGGGTGA GTGAAGTCTT TAGCGATCGC
TGGATTGATT TTGGCTGGGC ACCGACGATC GCAACTCAGT TTTCGCAACT GGGGCCGGCA
GCCTCCCCGG CGATCCTGAC TGCTGCAGCC GTCGCCCCTG TTGATGCCAA TCCTCTCCAG
ATTCCACCCA CGGCTGTGCT GGACAAAAGC GAATTGATCC TGCCCCTGCC GGAGGCCGTG
CGCGATCGCT ATCTGGCGCT TTGGCAAACC ATGCGCCAGG GTTGA
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| Protein sequence | MFLSRRRFLQ ASVGLPGLAL AGCRSADLQL LLPGNTVPAP ILRRFQDRTQ ITVQLDRAAG
LVDSSRLLLT EDPSRLPNLL GIGDAWLQSA IASGRLAPFN PNHWRHWTSL PQRWRQQLRR
DRQGVPSEAG EIWAAPYRWG TTMIAFRRDR LTSPLQDWTD LWRPELRGQL ILPDDPREVI
GLTLKRLGWS YNQANLAEIP QLEPLLAALQ QQVKLYSSRN YLQPLLLGDA LAAVGWSADI
LAALRRDSRL AAVVPRSGTA IWLDLWVQPQ GRVSEVFSDR WIDFGWAPTI ATQFSQLGPA
ASPAILTAAA VAPVDANPLQ IPPTAVLDKS ELILPLPEAV RDRYLALWQT MRQG
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