Gene Synpcc7942_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2241 
Symbol 
ID3773897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2306546 
End bp2307418 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content60% 
IMG OID637800688 
Producthypothetical protein 
Protein accessionYP_401258 
Protein GI81301050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000480032 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGTT CTCTCTCCTT GTCTCTGATT ACCTTAGTGG CGACGGGCAG TGCTCTCTTG 
GGCGGCTGCA CTGAAACCAG TAGTTCACCT GCCTCGGCGC CCAGTGTGGT GCCCGAGGCA
GCAGCCAATC AAGCAGCTGA GGCTCCCCGT GCTAATGCCC CTCGGCCCCA ACTCGCTAAG
ACAGCCACGA TGCAACTGGC TGTTCAAGAT GTGCCCACAG CGGTACGGTC GGCGCAAGCG
ATCGTGAATC GAGAGCAGGG GGACATTTTG CAGCAGACCG AGTCCAGCGG CGATTCCCCC
AGTGCCACCC TGCAGGCGCG GATCCCCGCA GACCGGTTAG AGACCGCGAT CGCCGCCTTT
CGGGCTCTCG GGCGGGTCGA TACCGTCAAT GTTCAAGCGG AGGATGTCGC CCGACAGCTC
ACAGATTTAC AAGCCCGACT GACCAATTTA GAGCGCACCG AACGGGCTCT TCAGAGCATT
CTCGATCGCG CTACTAAGGT GGAAGACGTG CTCAAAGTGA CCGAGCGACT GAGCAGCACG
CGGGAACAAA TCGAGCAGCT CAAAGCAGAA CAACTCAACC TCCGCACTCG TGTCGCCTAT
TCAACGATCA CCCTGCAATT CCAATCGCAA ATCCTGGGAG AAACGGCCCT ACCAGCCTTT
GCCCCAGAAC TGGAGACCGC TTGGCGTCAA TCCTCGCAGT CAGTCTTGCT ACTCATCCGG
AGTTTGTTGG TAGCCGGCGT TTGGATCGTG GCCTACAGCC CCCTCTTCCT GCTGTTGATC
GGCGGCGGCT ACGGTCTGTT GCGCTACCAG CAGCGGAGCA CCACGACTAG CAGCGATCGC
AGGGACCAAC CGCCCCAGCA GCCGCAGGCT TAG
 
Protein sequence
MKRSLSLSLI TLVATGSALL GGCTETSSSP ASAPSVVPEA AANQAAEAPR ANAPRPQLAK 
TATMQLAVQD VPTAVRSAQA IVNREQGDIL QQTESSGDSP SATLQARIPA DRLETAIAAF
RALGRVDTVN VQAEDVARQL TDLQARLTNL ERTERALQSI LDRATKVEDV LKVTERLSST
REQIEQLKAE QLNLRTRVAY STITLQFQSQ ILGETALPAF APELETAWRQ SSQSVLLLIR
SLLVAGVWIV AYSPLFLLLI GGGYGLLRYQ QRSTTTSSDR RDQPPQQPQA