| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2209 |
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| Symbol | |
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| ID | 3773767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2286806 |
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| End bp | 2287735 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800655 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_401226 |
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| Protein GI | 81301018 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATTTC AAGTCGAATG CGTCGAGAGC CGCACTGAAG CCGACCAAGG GCAATATGGC
CGCTTTTCCA TCGAGCCTCT CGCTCGTGGG CAAGGTACAA CGGTTGGCAA TGCGCTCCGG
CGTGTGTTGC TCTCCAACCT AGAAGGAACA GCCGTCACAG CTGTCCGGAT CGGTGGTGTC
AACCACGAAT TCGCAACCAT CCCCGGCGTG CGGGAGGATG TCCTCGACAT CTTGCTCAAC
GTCCGTGAGT TGGTGGTGCA TGCCCACAGT CCTCAGCCCC AGATTGGTCG GCTGCGGGTG
GTGGGTCCGG CAACTGTCAC GGCTGCTGAT GTTGACTTTG GCCCTGAAGT TGAAGTCATC
AATCCCAATC ACTACATCGC TTCGCTCTCT GAGGGTGCCA CCCTCGAGAT GGAGTTGAAA
GTTGAGTGGG GCACGGGCTA CCGCGCCATC GACCGCAGCC ATGACGAAAC GACTGCCCTA
GACTTTCTGC AACTTGATGC TGTATTCATG CCGGTGCGTC GGGTGAACTA CAGCGTTGAA
GATGCGCGCG TCGGGGAATC CACGGCCATC GACCGCCTCG TACTCGAGGT TTGGACCAAT
GGCAGTCTCT CGCCCCAGGA AGCACTGAGC CAAGCCGCCT CTTGTCTCGT CGCGCTGTTC
GAGCCGTTGA AAAACGTCAG TGTTGGCAGT ACCCACACCG CCGATCCTGA GCCCACGCCC
GAAAGCCAAA CGCCGATCGA AGATCTGCAG CTTTCGGTTC GGGCTTACAA CTGCCTGAAG
CGGGCGCAAG TGAACTCCGT TGCTGACTTG CTGAGCTACA CCTACGAAGA TCTACTGGAG
ATCAAAAACT TCGGCCAGAA ATCGGCTGAA GAGGTGGTCG AAGCTCTCGA GCGCATCGGC
ATTAAGCTCC AGGAATCGAA AGTTTCCTGA
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| Protein sequence | MTFQVECVES RTEADQGQYG RFSIEPLARG QGTTVGNALR RVLLSNLEGT AVTAVRIGGV
NHEFATIPGV REDVLDILLN VRELVVHAHS PQPQIGRLRV VGPATVTAAD VDFGPEVEVI
NPNHYIASLS EGATLEMELK VEWGTGYRAI DRSHDETTAL DFLQLDAVFM PVRRVNYSVE
DARVGESTAI DRLVLEVWTN GSLSPQEALS QAASCLVALF EPLKNVSVGS THTADPEPTP
ESQTPIEDLQ LSVRAYNCLK RAQVNSVADL LSYTYEDLLE IKNFGQKSAE EVVEALERIG
IKLQESKVS
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