| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2190 |
|---|
| Symbol | |
|---|
| ID | 3773747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2267935 |
|---|
| End bp | 2268357 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637800635 |
|---|
| Product | methionine sulfoxide reductase B |
|---|
| Protein accession | YP_401207 |
|---|
| Protein GI | 81300999 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.443162 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA AAATTCGGAA AAGCGAAGAA GAGTGGCGGG CCCAGCTCAC CCCTGAGCAG
TTTCAAGTCA CTCGGAAACA CGGGACTGAG CGAGCTTTCA CGGGCGCCTA TTGGGATACC
AAAGATCCCG GCCTCTACCG GTGTATCTGT TGTGATGCGC CTCTGTTCCG GTCGGATACC
AAGTTTGATT CCGGCACTGG CTGGCCGAGC TTTTGGGCGC CGGTTGATGA GTCCGCGATC
ACCTACAAAA AAGATTTCAG CTTCCTGATG ATGCGCACTG AGATTCTTTG CGCCCGTTGC
GATGCGCACT TGGGACATGT CTTTCCCGAT GGCCCGAAAC CTACAGGACA GCGTTATTGC
CTCAATTCGG CTTCGCTGAA GTTAGACACT GAAACTCCGG CGAGTCCCAG TTCCGAAGCT
TAG
|
|---|
| Protein sequence | MTEKIRKSEE EWRAQLTPEQ FQVTRKHGTE RAFTGAYWDT KDPGLYRCIC CDAPLFRSDT
KFDSGTGWPS FWAPVDESAI TYKKDFSFLM MRTEILCARC DAHLGHVFPD GPKPTGQRYC
LNSASLKLDT ETPASPSSEA
|
|---|
| |