| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2188 |
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| Symbol | |
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| ID | 3773745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2266131 |
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| End bp | 2267534 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637800633 |
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| Product | isochorismate synthase |
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| Protein accession | YP_401205 |
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| Protein GI | 81300997 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.976142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.55094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCC TGTCAACTGC CTCCTCTCTT CAGTCATTCA GCGAGCTGCT GGCTTGGGTT
CGTCCTGCTC TAGAGGCGAC GCCAACGGCT CGACTCCTGA GCCTATCGCT GCCGTTACCC
CGTCTTGATC CGCTGGCTGC ATGGGGTGTG TTGGGTAGTA GTCGCGATCG CCACTACTAC
CAAGAGCGTC CCGCCACCCA AGAGGCGATC GTGGCTGTAG GGCCAGCAGC CCTGCTGGAA
CTGAATGGAC CCCAGCGCTT TCAGCAGGCC CAGACCTTTA TCAATGCCTG TCTTGCTCAG
GGGCTGCGCT TACAGGCCGA AGGTGCAACT CTAGGGCCGA GTTTCTGTTG CAGTTTTAGC
TTTTTTGAAG ATGTTGCAGG GACAGCGCCA GCAGCTCCGG CGACGGTCTT TTTGCCACGT
TGGCAGGTGC GTTGCCAAGC TGATCGCACG GTACTGACGG CCAGTTTTGC AATCGCCGAT
CGCGAGAGCT ATCGCCAACG GCTGGAAGAA GTCTGGCAGG TCTATCAACA TCTGCGGGCG
ATCGCCCAGC AACCGTTTCA GCTGCCGCCG CTGCGTCCCA ATCGCTGGCT AGAGCAACAG
AGCAGTGATC CCCAGTCCTT TCGAGCCGGT GTAGAAACGG TCTTAGCTGA GATTGCGGCC
GGTCGTCTCC ATAAGGGCGT CTTGGCGCGC TGTCTAGAGG CGATCGCAGA ATTTGCGATC
GTGCCGGAAG GCGTGCTCGA TCGCCTGCGG CAGCGTTTTG CTGACTGCGC CATCTTCAGC
TGCGGCGATG GTCGGGGCAG TGTTTTCCTC GGGGCAACGC CCGAACGCTT AGCGGCGGTG
GAAGCGGGTC AACTGGTGAC TGAGGCGCTG GCGGGTTCTG CCCCACGGGG TGAAACCATT
GCGGCTGATC AAGCCCTTGG GCAGGCGCTG CAAGCCAACC CCAAGGAACT GCAAGAACAT
CAGCTGGTGG CGCAATTTAT CCGCCAAACC CTGCAGGAAC TTGGCCTTGA GCCTCACTTG
AGCGATCGGC CCCAACTGCG TCGCCTGTCG AACATTCAAC ACCTGCACAC CCCGATCGCC
GCTCCACTGC CCGCTGCTCT GCCTCTACTG GATGTTGTGG CTCAGCTCCA TCCCACGCCA
GCCGTTGCGG GGTTACCCAA GCAGGCTGCC GAACAGGCGA TTCGTCGGCT GGAACCCTTT
GAGCGATCGC TCTACGCTGC ACCGGTTGGC TGGGTGGATG ACCAAGGAAA CGGGGAATTC
TTAGTCGGGA TTCGCTCGGC GTCGATTCAA GGGAATCGGG TGCGTCTCTG TGCGGGTGCT
GGCATTGTGC CGGGGTCTCA ACCCGATCAG GAACTCGTTG AAGTCGATCT CAAGCTCCAG
GCCATGCTCG GCGCGCTGAT CTGA
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| Protein sequence | MAALSTASSL QSFSELLAWV RPALEATPTA RLLSLSLPLP RLDPLAAWGV LGSSRDRHYY
QERPATQEAI VAVGPAALLE LNGPQRFQQA QTFINACLAQ GLRLQAEGAT LGPSFCCSFS
FFEDVAGTAP AAPATVFLPR WQVRCQADRT VLTASFAIAD RESYRQRLEE VWQVYQHLRA
IAQQPFQLPP LRPNRWLEQQ SSDPQSFRAG VETVLAEIAA GRLHKGVLAR CLEAIAEFAI
VPEGVLDRLR QRFADCAIFS CGDGRGSVFL GATPERLAAV EAGQLVTEAL AGSAPRGETI
AADQALGQAL QANPKELQEH QLVAQFIRQT LQELGLEPHL SDRPQLRRLS NIQHLHTPIA
APLPAALPLL DVVAQLHPTP AVAGLPKQAA EQAIRRLEPF ERSLYAAPVG WVDDQGNGEF
LVGIRSASIQ GNRVRLCAGA GIVPGSQPDQ ELVEVDLKLQ AMLGALI
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