| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2152 |
|---|
| Symbol | |
|---|
| ID | 3773709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2236384 |
|---|
| End bp | 2237643 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637800597 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_401169 |
|---|
| Protein GI | 81300961 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.191096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGAAT CCATCACTGA ACCTAAGAGC TCGCCAACGC CCCGTCTGCC CTCGCCCCCC
GATCGCCGCA CCTTCTTTCG CTATGCCAGA ATTGCCCTCG GCGTAGGCCT CATCTCGCTA
GCAGCCTACA TACTCTGGCT GCGCAACAGC AGCGTTTCCA GTCGAGTTGG CTATATTAAT
GGCACTGTTA TTAAGTTATA TGCCCCGATT CCTGGGGTCG CACAACTCAA GCCGCTAGAG
CCGGGGCAAG CCTTGCAAAA AGGGCAGGTA CTCGGTGAGA TTACGAACGA TCGCAATCCA
GAATTGGAAA CCGATCGCCA AAATCTGGTG ACGCGTTTGG CCCAAGCTGA AGCAGAGCGA
GCTGCTTTCG ATGCCCAAAT CGCGAGTCGT GAGCAGGTGC GATCGCAAAT TCTCAGCAAG
GCCAATAACC AGCAACAACT TGAGGAACAG TTCTTTCAGC AGGGGTCTGA CCGAACCCGT
AATGAATTAC GCCAAGCTCA AGAAAGTCTG GCCTTTGCGG AAATCGAGGC AAAACGATAT
CAAAGTTTGG TGGAGAGTGG TGCTGTCTCA CAGCAACTAG CAGACGCTGC CTTGTCGCAG
GCACGTGAGG CAAGAGCGGT AGTAGCGGCC AAACAAAATG AGTTACAGCG CCAACGAACG
TCCCTCTTAG CGATTCGTCA AGGATTACAG CTCGATTCAG CTCGAACTCT AAGTATTCCA
GAACTACGAC TTCTCGATCT GGAAAAAGAA CTAGTCGACC TGACTCTGAA ACGACAGACT
GTTAACACAA CAATTCAAGA AATTCGCCTT GAGATTATCA ATATTCAAGA GCAGATTAAA
CTTCAGAAAA AAGCCTTAAT TAAGGCTCCG ATTCAAGGAG TTGTTTGGTC AATTATCAAT
CGAACTGGAC TGTTAGGTAT TCCACTAACG GCGGGTGATC CGCTGTTGGA AATGGTGACC
TGTGAAGACA CCTGGATCAC GGCTTTAGTT TCTGAGCGCG ATCGCAATCG ACTGCGAGTG
GGTCAACAAG CAGATATTCG TCTACTGGAT GGCAGCAATA CAAACATTTT GGGCCGAATT
CGCTCGATTC GAGGAGGACC CGGTAAAGTC ACTGCCGGAA CTGATGTCGC AGTACCTCCG
CCGGATTTAG TGCGCAATGA ACTAGAAGTT CAGGTGAGTC TCCTCGAGAA ACCGCCAGCC
TTGGGAGCCG GAAATTTCTG TGGCATTGGT CAAAGTGTGA CCGTCAACTT TAATCCCTAG
|
|---|
| Protein sequence | MPESITEPKS SPTPRLPSPP DRRTFFRYAR IALGVGLISL AAYILWLRNS SVSSRVGYIN
GTVIKLYAPI PGVAQLKPLE PGQALQKGQV LGEITNDRNP ELETDRQNLV TRLAQAEAER
AAFDAQIASR EQVRSQILSK ANNQQQLEEQ FFQQGSDRTR NELRQAQESL AFAEIEAKRY
QSLVESGAVS QQLADAALSQ AREARAVVAA KQNELQRQRT SLLAIRQGLQ LDSARTLSIP
ELRLLDLEKE LVDLTLKRQT VNTTIQEIRL EIINIQEQIK LQKKALIKAP IQGVVWSIIN
RTGLLGIPLT AGDPLLEMVT CEDTWITALV SERDRNRLRV GQQADIRLLD GSNTNILGRI
RSIRGGPGKV TAGTDVAVPP PDLVRNELEV QVSLLEKPPA LGAGNFCGIG QSVTVNFNP
|
|---|
| |