Gene Synpcc7942_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2141 
Symbol 
ID3773698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2226031 
End bp2226495 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content54% 
IMG OID637800586 
Producthypothetical protein 
Protein accessionYP_401158 
Protein GI81300950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.292738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.356716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA ATACACCTCC GTCTTGGCGT CCGATTCTGG CGATCGCCTT GTCCCTCGTT 
CTACTGATTG GTCTTTGGCT CGGACTAGGG CCGCAGTACG GGATTTATGT GCAAAAGCTA
CGCGGTGAAG CCCAGCTCAA AGAAGCGGAA TACACTCGCC GCATCGCCGT CCTTGAAGCA
CAAGCCAAAT TGGATAGCGC CAAACTTCAA GCCCAAGCCG AAGTTGAACG GGCGCGGGGT
TTAGCCCAGT CCAACCAAAT CATTGGCAAT TCCCTGAAAG AGAACGAGGT CTATCTGCAG
TGGCTTTGGA TTACAAGTGT CGCTGAGAGC CAAAACCAAA GCGATCGCAC CGTGATCTAC
ATTCCCACCG AAAAGGGAAT CCCCCTACCA GCTCTGGAAG CAGGCCGACT CCTGCAGGAA
AAAGCCAGCG CAGAGCTTCA GCCGCCGCTC AGTTTTGCAC CGTAG
 
Protein sequence
MTKNTPPSWR PILAIALSLV LLIGLWLGLG PQYGIYVQKL RGEAQLKEAE YTRRIAVLEA 
QAKLDSAKLQ AQAEVERARG LAQSNQIIGN SLKENEVYLQ WLWITSVAES QNQSDRTVIY
IPTEKGIPLP ALEAGRLLQE KASAELQPPL SFAP