Gene Synpcc7942_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2140 
Symbol 
ID3773697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2224311 
End bp2224742 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content56% 
IMG OID637800585 
Productcytidine deaminase 
Protein accessionYP_401157 
Protein GI81300949 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.621603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.187784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA ATGAGGAGAT AGCGATGAAG CTTGACCAAG CGCTAGTCGA CGCTGCCATT 
GATCTCTTGG AACAACGCTT TCCAATGGCA GAAGGGATTG CGGCAGCTTT ATACACGGAC
GACGGTCAGA TCCTAACGAG CGTTGTCTTC CAGCCTGAGT GGGGCGGGGG TGGATTGTGT
GCCGAAACGG GCGCCATCTG TGAAGCAGTG AAGTTAGACA AACGGATCAC GGCTTCGGTG
TGCGTCTCGC GGTTGTCGGG CGATGGCCCA ATTATGATCC TGACCCCGTG TGGAATCTGT
CAGGAGCGCC TATTTCACTG GGGAGAGAGC GTGGAGGTCG CCACGCCCAC CGCTCAAGAT
GCTCGCAGGT GGATCGCCAA GACGCTTGGG GAGGTCCAGC CGTATTACTG GGCGAAAGCT
TTTAAGGAGT GA
 
Protein sequence
MQQNEEIAMK LDQALVDAAI DLLEQRFPMA EGIAAALYTD DGQILTSVVF QPEWGGGGLC 
AETGAICEAV KLDKRITASV CVSRLSGDGP IMILTPCGIC QERLFHWGES VEVATPTAQD
ARRWIAKTLG EVQPYYWAKA FKE